Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_B07
         (484 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC1682.03c |mug174||meiotically upregulated gene Mug174|Schizo...    28   0.64 
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ...    25   6.0  

>SPCC1682.03c |mug174||meiotically upregulated gene
           Mug174|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 626

 Score = 28.3 bits (60), Expect = 0.64
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 463 IVPIKLW*EICQLFLDDSRFLNISIMHNIL 374
           +VPIK W    QL L DS  L   +++NI+
Sbjct: 11  LVPIKQWIHTSQLDLSDSSSLVADLLYNII 40


>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 817

 Score = 25.0 bits (52), Expect = 6.0
 Identities = 18/46 (39%), Positives = 27/46 (58%)
 Frame = +3

Query: 75  ETTASSRSMTNTGASPGPLLERIAT*LVHQLLTDDISVAATCANEH 212
           +T A   ++TN  + P    E++ T L+ Q  + + SVAAT ANEH
Sbjct: 637 DTKAGRTTITNITSEPLDTPEQV-TWLLDQA-SKNRSVAATNANEH 680


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,084,289
Number of Sequences: 5004
Number of extensions: 41992
Number of successful extensions: 98
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 98
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 186042952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)