Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_B05
(550 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpa... 251 2e-67
AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily a... 219 1e-57
AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical ... 45 3e-05
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 44 5e-05
AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical ... 36 0.019
AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical ... 36 0.019
U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical pr... 32 0.24
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 28 3.9
U39667-4|AAQ91908.1| 123|Caenorhabditis elegans Xo lethal prote... 28 5.1
U39667-3|AAQ91909.1| 417|Caenorhabditis elegans Xo lethal prote... 28 5.1
U39667-2|AAQ91910.1| 426|Caenorhabditis elegans Xo lethal prote... 28 5.1
L35129-3|AAA67048.1| 355|Caenorhabditis elegans xol-1 protein. 28 5.1
L35129-2|AAA67049.1| 417|Caenorhabditis elegans xol-1 protein. 28 5.1
L35129-1|AAA67047.1| 426|Caenorhabditis elegans xol-1 protein. 28 5.1
AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical ... 28 5.1
Z66521-19|CAA91404.2| 217|Caenorhabditis elegans Hypothetical p... 27 6.7
AL031269-4|CAA20335.2| 217|Caenorhabditis elegans Hypothetical ... 27 6.7
AF303256-1|AAG50214.1| 217|Caenorhabditis elegans 2L737 protein. 27 6.7
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 27 8.9
U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein. 27 8.9
U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical p... 27 8.9
>U41015-2|AAA82311.1| 491|Caenorhabditis elegans Vacuolar h atpase
protein 12 protein.
Length = 491
Score = 251 bits (615), Expect = 2e-67
Identities = 115/143 (80%), Positives = 131/143 (91%)
Frame = +1
Query: 91 HVLAVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVS 270
H A+ R++ + PRL Y+TV GVNGPLVIL++VKFP+FSEIV++ L DG+ RSGQVLE+S
Sbjct: 13 HKSAIIRNYNTNPRLIYQTVCGVNGPLVILNDVKFPQFSEIVKITLPDGSKRSGQVLEIS 72
Query: 271 GSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF 450
+KAVVQVFEGTSGIDAKNT+CEFTGDILRTPVSEDMLGR+FNGSGKPIDKGPP+LAEDF
Sbjct: 73 KNKAVVQVFEGTSGIDAKNTICEFTGDILRTPVSEDMLGRIFNGSGKPIDKGPPVLAEDF 132
Query: 451 LDIQGQPINPWSRIYPEEMIQTG 519
LDI GQPINPWSRIYPEEMIQTG
Sbjct: 133 LDINGQPINPWSRIYPEEMIQTG 155
>AC006708-2|AAF60418.1| 501|Caenorhabditis elegans Temporarily
assigned gene nameprotein 300 protein.
Length = 501
Score = 219 bits (535), Expect = 1e-57
Identities = 100/143 (69%), Positives = 123/143 (86%)
Frame = +1
Query: 91 HVLAVSRDFISQPRLTYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVS 270
H A+ +++ ++P+LTY+TV GVNGPLVI+ VKFP F+EIV++ L +G +R GQVLE S
Sbjct: 25 HRTALIQNYSTKPKLTYQTVFGVNGPLVIVHNVKFPMFNEIVKITLPNGQIRMGQVLESS 84
Query: 271 GSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDF 450
+KAVVQVFEGT+G+DAK T CEFTGDI R+PVS DMLGR+FNGSGKPIDKGPP+L ED+
Sbjct: 85 KNKAVVQVFEGTTGVDAKFTTCEFTGDIFRSPVSLDMLGRIFNGSGKPIDKGPPVLPEDY 144
Query: 451 LDIQGQPINPWSRIYPEEMIQTG 519
LDI GQPINP++RIYPEEMIQTG
Sbjct: 145 LDINGQPINPFNRIYPEEMIQTG 167
>AL033512-1|CAA22076.1| 606|Caenorhabditis elegans Hypothetical
protein Y49A3A.2 protein.
Length = 606
Score = 45.2 bits (102), Expect = 3e-05
Identities = 32/131 (24%), Positives = 65/131 (49%)
Frame = +1
Query: 136 TYKTVSGVNGPLVILDEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSGI 315
+Y V GV+GP+V +++ E+V++ + G+++ + G A +QV+E TSG+
Sbjct: 6 SYGFVYGVSGPVVTAEKMAGSAMYELVRVGHQELV---GEIIRLEGDYATIQVYEETSGV 62
Query: 316 DAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDKGPPILAEDFLDIQGQPINPWSRIY 495
+ + TG L + ++G +F+G +P+ I ++ +G N SR
Sbjct: 63 TIGDPVLR-TGKPLSVELGPGIMGSIFDGIQRPLKDIADITQSIYIP-KGVSTNALSREA 120
Query: 496 PEEMIQTGNLR 528
+ + + +LR
Sbjct: 121 RWDFVVSKDLR 131
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 44.4 bits (100), Expect = 5e-05
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Frame = +1
Query: 256 VLEVS---GSKAVVQV-FEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPIDK 423
+LEVS G V + +GT G+ + + TGD ++ PV + LGR+ N G+PID+
Sbjct: 105 ILEVSQHLGDNVVRCIAMDGTEGLVRGQPVAD-TGDPIKIPVGPETLGRIMNVIGEPIDE 163
Query: 424 GPPILAEDFLDIQGQPINPWSRIYPEEMIQTG 519
PI +++F I + +E++ TG
Sbjct: 164 RGPIASKNFAAIHAEAPEFVEMSVEQEILVTG 195
>AL023815-4|CAF31480.1| 511|Caenorhabditis elegans Hypothetical
protein H28O16.1d protein.
Length = 511
Score = 35.9 bits (79), Expect = 0.019
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 250 GQVLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPID-KG 426
G + + V VF G + + + + TG I+ PV + +LGRV + G PID KG
Sbjct: 62 GMAMNLDVDNVGVVVF-GNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKG 120
Query: 427 P 429
P
Sbjct: 121 P 121
>AL023815-1|CAA19429.1| 538|Caenorhabditis elegans Hypothetical
protein H28O16.1a protein.
Length = 538
Score = 35.9 bits (79), Expect = 0.019
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 250 GQVLEVSGSKAVVQVFEGTSGIDAKNTLCEFTGDILRTPVSEDMLGRVFNGSGKPID-KG 426
G + + V VF G + + + + TG I+ PV + +LGRV + G PID KG
Sbjct: 89 GMAMNLDVDNVGVVVF-GNDKVIREGDIVKRTGAIVDVPVGDGLLGRVVDALGNPIDGKG 147
Query: 427 P 429
P
Sbjct: 148 P 148
>U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical
protein C18F3.4 protein.
Length = 306
Score = 32.3 bits (70), Expect = 0.24
Identities = 21/66 (31%), Positives = 30/66 (45%)
Frame = -3
Query: 347 PVNSQRVFLASIPDVPSNTWTTAFEPLTSRT*PERSVPSASLSCTISENLGNLTSSKMTN 168
P S SI D SN+ P ++ P S+P+ S S +E + T S ++N
Sbjct: 66 PTTSSNSVKESINDDESNSENNKLSPPRRQSNPHSSLPAISSSTVKNEPTDSWTPSALSN 125
Query: 167 GPFTPD 150
P TPD
Sbjct: 126 DP-TPD 130
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 28.3 bits (60), Expect = 3.9
Identities = 22/77 (28%), Positives = 34/77 (44%)
Frame = -3
Query: 395 NTRPNMSSDTGVRRMSPVNSQRVFLASIPDVPSNTWTTAFEPLTSRT*PERSVPSASLSC 216
+T+P MS+ G S V S L S VPS+T T TS ++ +S +
Sbjct: 1890 STQPQMSTSQGSSAGSTVASSTAGLVSTSTVPSSTGTMG---STSSGTVGSTISESSTAA 1946
Query: 215 TISENLGNLTSSKMTNG 165
+ S G+ + T+G
Sbjct: 1947 STSSQTGSTVTIGSTSG 1963
Score = 27.5 bits (58), Expect = 6.7
Identities = 24/80 (30%), Positives = 33/80 (41%)
Frame = -3
Query: 395 NTRPNMSSDTGVRRMSPVNSQRVFLASIPDVPSNTWTTAFEPLTSRT*PERSVPSASLSC 216
+T+P MS+ G S V S L S VPS+T T S S ++
Sbjct: 1568 STQPQMSTSQGSSAGSTVASSTAGLVSTSTVPSSTGTMG------------STSSGTVGS 1615
Query: 215 TISENLGNLTSSKMTNGPFT 156
TISE+ ++S T T
Sbjct: 1616 TISESSTTASASSQTGSTVT 1635
Score = 27.1 bits (57), Expect = 8.9
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = -3
Query: 320 ASIPDVPSNTWTTAFEPLTSRT*PERSVPSASLSCTISENLGNLTSSKMTNGPFTPDT 147
AS VPS T +T P S + S LS TIS + + T SK ++G +P T
Sbjct: 1409 ASSSPVPSQTSSTPTNPTGS------TESSTLLSSTISGSTQHTTMSKASSGSTSPST 1460
>U39667-4|AAQ91908.1| 123|Caenorhabditis elegans Xo lethal protein
1, isoform a protein.
Length = 123
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 16 LLSGLPKSEN*KMAKTLSAAQASKEHVLAVSRDFISQPRL 135
+L+ PKS N M L A +H L++ RDFI Q +L
Sbjct: 69 ILAREPKSSNEHMIDDLPK-HAHDQHTLSILRDFIDQLKL 107
>U39667-3|AAQ91909.1| 417|Caenorhabditis elegans Xo lethal protein
1, isoform b protein.
Length = 417
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 16 LLSGLPKSEN*KMAKTLSAAQASKEHVLAVSRDFISQPRL 135
+L+ PKS N M L A +H L++ RDFI Q +L
Sbjct: 69 ILAREPKSSNEHMIDDLPK-HAHDQHTLSILRDFIDQLKL 107
>U39667-2|AAQ91910.1| 426|Caenorhabditis elegans Xo lethal protein
1, isoform c protein.
Length = 426
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 16 LLSGLPKSEN*KMAKTLSAAQASKEHVLAVSRDFISQPRL 135
+L+ PKS N M L A +H L++ RDFI Q +L
Sbjct: 69 ILAREPKSSNEHMIDDLPK-HAHDQHTLSILRDFIDQLKL 107
>L35129-3|AAA67048.1| 355|Caenorhabditis elegans xol-1 protein.
Length = 355
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 16 LLSGLPKSEN*KMAKTLSAAQASKEHVLAVSRDFISQPRL 135
+L+ PKS N M L A +H L++ RDFI Q +L
Sbjct: 69 ILAREPKSSNEHMIDDLPK-HAHDQHTLSILRDFIDQLKL 107
>L35129-2|AAA67049.1| 417|Caenorhabditis elegans xol-1 protein.
Length = 417
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 16 LLSGLPKSEN*KMAKTLSAAQASKEHVLAVSRDFISQPRL 135
+L+ PKS N M L A +H L++ RDFI Q +L
Sbjct: 69 ILAREPKSSNEHMIDDLPK-HAHDQHTLSILRDFIDQLKL 107
>L35129-1|AAA67047.1| 426|Caenorhabditis elegans xol-1 protein.
Length = 426
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/40 (40%), Positives = 22/40 (55%)
Frame = +1
Query: 16 LLSGLPKSEN*KMAKTLSAAQASKEHVLAVSRDFISQPRL 135
+L+ PKS N M L A +H L++ RDFI Q +L
Sbjct: 69 ILAREPKSSNEHMIDDLPK-HAHDQHTLSILRDFIDQLKL 107
>AL031635-6|CAA21044.1| 761|Caenorhabditis elegans Hypothetical
protein Y47D3B.9 protein.
Length = 761
Score = 27.9 bits (59), Expect = 5.1
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +1
Query: 181 DEVKFPKFSEIVQLKLADGTLRSGQVLEVSGSKAVVQVFEGTSGIDAKNTL 333
D+ F +FSE + S V++ S SK FEG+SG DA +T+
Sbjct: 231 DDGIFNRFSEKLAKMARRKQQESTLVIDPSHSKDDSAFFEGSSGSDAPSTI 281
>Z66521-19|CAA91404.2| 217|Caenorhabditis elegans Hypothetical
protein VW02B12L.4 protein.
Length = 217
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 123 PAPPHLQDSVRCKWTIGHLR*GQIPQVL 206
P P L V KWT+ L+ GQ+ +L
Sbjct: 102 PIPTSLNQIVNTKWTVNQLQEGQLTMLL 129
>AL031269-4|CAA20335.2| 217|Caenorhabditis elegans Hypothetical
protein VW02B12L.4 protein.
Length = 217
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 123 PAPPHLQDSVRCKWTIGHLR*GQIPQVL 206
P P L V KWT+ L+ GQ+ +L
Sbjct: 102 PIPTSLNQIVNTKWTVNQLQEGQLTMLL 129
>AF303256-1|AAG50214.1| 217|Caenorhabditis elegans 2L737 protein.
Length = 217
Score = 27.5 bits (58), Expect = 6.7
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 123 PAPPHLQDSVRCKWTIGHLR*GQIPQVL 206
P P L V KWT+ L+ GQ+ +L
Sbjct: 102 PIPTSLNQIVNTKWTVNQLQEGQLTMLL 129
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 8.9
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -3
Query: 395 NTRPNMSSDTGVRRMSPVNSQRVFLASIPDVPSNTWTTAFE-PLTSRT*PERS--VPSAS 225
+T P S+ T S + S PS+T TT+ P TS T P S PS++
Sbjct: 454 STSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSST 513
Query: 224 LSCTISENLGNLTSSKMT 171
S ++S + SS T
Sbjct: 514 ASSSVSSTASSTQSSTST 531
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 27.1 bits (57), Expect = 8.9
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = -3
Query: 395 NTRPNMSSDTGVRRMSPVNSQRVFLASIPDVPSNTWTTAFE-PLTSRT*PERS--VPSAS 225
+T P S+ T S + S PS+T TT+ P TS T P S PS++
Sbjct: 454 STSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSST 513
Query: 224 LSCTISENLGNLTSSKMT 171
S ++S + SS T
Sbjct: 514 ASSSVSSTASSTQSSTST 531
>U52517-1|AAA97927.1| 846|Caenorhabditis elegans hum-3 protein.
Length = 846
Score = 27.1 bits (57), Expect = 8.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 50 KWQKPSPLPKQARSMSWLCPGISYPSPA 133
KW+K P+++ S +W C S PS A
Sbjct: 758 KWRKNVRRPRKSTSCNWRCRSRSSPSEA 785
>U27312-10|AAA68253.1| 231|Caenorhabditis elegans Hypothetical
protein F26A1.12 protein.
Length = 231
Score = 27.1 bits (57), Expect = 8.9
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +1
Query: 286 VQVFEGTSGIDAKNTLCEFTGDIL 357
+QVF G +G++ N C G +L
Sbjct: 89 IQVFNGAAGLEGSNNACRAQGAVL 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,434,061
Number of Sequences: 27780
Number of extensions: 299586
Number of successful extensions: 840
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 840
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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