Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_B04
(550 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 26 0.22
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 25 0.67
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 23 2.7
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 3.6
AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein. 22 3.6
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 3.6
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 3.6
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.7
L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein pro... 21 8.2
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 21 8.2
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 21 8.2
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 8.2
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 26.2 bits (55), Expect = 0.22
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +1
Query: 1 VESMSIPAEVHEIE-GKKYASFGSTVAIHSCTPEKVADFAKITHHYCD 141
V ++ A+ ++ + K+YA G++ + P VADF K+ + D
Sbjct: 95 VNVRAVVAQYYDTDVNKEYAIRGNSAILKCVVPSFVADFVKVLSWHTD 142
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 24.6 bits (51), Expect = 0.67
Identities = 14/43 (32%), Positives = 17/43 (39%)
Frame = -2
Query: 396 DSVMVPALGGDNGDQLSVLVDDGSSRHVDVGGLEGRSASPLRQ 268
D V L G GD L L+ G + GLE + P Q
Sbjct: 723 DLVRFSTLEGSGGDSLRTLLQRGQETGAEWPGLEHANIGPYIQ 765
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.6 bits (46), Expect = 2.7
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 379 GNHYAVSTFEGEGGYFATTRPWKVVENPNT 468
G HY V + EG G+F + K+ P T
Sbjct: 76 GFHYGVHSCEGCKGFFRRSIQQKIQYRPCT 105
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 379 GNHYAVSTFEGEGGYFATT 435
G HY V + EG G+F T
Sbjct: 119 GKHYGVYSCEGCKGFFKRT 137
>AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein.
Length = 80
Score = 22.2 bits (45), Expect = 3.6
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = -2
Query: 96 GCAAMYGYGGTKTGIFLPLNFVHLSRN 16
GCAA YGY T +F L RN
Sbjct: 22 GCAAPYGYKNIMTLSQDTSHFASLVRN 48
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 3.6
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = +1
Query: 379 GNHYAVSTFEGEGGYFATT 435
G HY V + EG G+F T
Sbjct: 119 GKHYGVYSCEGCKGFFKRT 137
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 22.2 bits (45), Expect = 3.6
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +2
Query: 293 PSSPPTSTWRELPSSTRTESWSPLSPPSAGTITLSPPS 406
P S +ST +P + + PP+ G +SP S
Sbjct: 356 PKSSESSTGSSIPKLNLSTALMSQPPPNFGVSQVSPVS 393
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 4.7
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -2
Query: 297 EGRSASPLRQVTVTRDQQYALAAVDKHL 214
+GR+ P +V VT QY + +HL
Sbjct: 648 DGRAMGPSERVHVTNMDQYNSILMIEHL 675
>L01588-1|AAA27735.1| 74|Apis mellifera zinc finger protein
protein.
Length = 74
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/18 (44%), Positives = 10/18 (55%)
Frame = +3
Query: 441 MESGRKP*HCRSIRRQVV 494
+ +G KP HC RQ V
Sbjct: 31 LHTGEKPYHCSHCDRQFV 48
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 303 RQRLHGGNSHRQQGRR 350
R L GG +H GRR
Sbjct: 260 RNHLSGGTNHWDSGRR 275
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 433 TRPWKVVENPNTVAVYGDR 489
T W ++E P T Y DR
Sbjct: 642 TLVWMIIEPPGTRFFYPDR 660
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 8.2
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = +1
Query: 433 TRPWKVVENPNTVAVYGDR 489
T W ++E P T Y DR
Sbjct: 732 TLVWMIIEPPGTRFFYPDR 750
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.132 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,555
Number of Sequences: 438
Number of extensions: 3818
Number of successful extensions: 19
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15704448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -