Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_B01
(278 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0416 + 2965761-2965809,2965995-2966172,2966256-2966327,296... 27 1.6
02_02_0726 - 13374061-13374151,13374576-13374787,13374990-133750... 27 2.1
10_08_0917 - 21550332-21550685,21550726-21550765,21551766-215517... 27 2.8
10_03_0046 + 7357777-7357992 27 2.8
07_03_0730 + 21030123-21030338 27 2.8
06_03_0934 - 26073084-26073220,26073296-26073345,26073465-260736... 27 2.8
05_05_0287 + 23868503-23869045 27 2.8
02_01_0729 - 5465521-5466005,5466481-5466793,5466878-5467094,546... 27 2.8
01_06_1064 + 34237919-34238155 27 2.8
10_07_0059 + 12475452-12475785,12475889-12476523 26 3.7
08_02_0350 + 16123139-16124041 26 3.7
02_01_0521 + 3768072-3768239,3768280-3768337,3769197-3769659,376... 26 4.9
01_06_0495 - 29779499-29781325 26 4.9
12_02_1199 + 26928685-26929671 25 6.5
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 25 6.5
10_08_0295 - 16581014-16583071 25 6.5
08_01_0554 - 4851698-4851943,4852041-4852760 25 6.5
05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663 25 6.5
10_05_0020 - 8094412-8094653,8094692-8095017,8095632-8095798 25 8.6
04_03_0589 - 17604361-17604800,17604887-17604949,17605025-176052... 25 8.6
03_05_0611 + 26113798-26114261,26114451-26114597,26114784-26115405 25 8.6
01_06_1435 + 37351653-37351990,37352241-37352424 25 8.6
>06_01_0416 +
2965761-2965809,2965995-2966172,2966256-2966327,
2966849-2967137,2967941-2968081,2969011-2969115,
2969354-2969501,2970023-2970075,2970189-2970266,
2970361-2970480,2970779-2970943,2971663-2971797,
2972063-2972182
Length = 550
Score = 27.5 bits (58), Expect = 1.6
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 135 VPWDHVEARARRCSGGVSAGKRHHRCNCYYVSE 37
VPW + ARR + G+ + HR N Y V +
Sbjct: 186 VPWMREDLFARRDARGIDKVRSSHRVNAYDVED 218
>02_02_0726 -
13374061-13374151,13374576-13374787,13374990-13375002,
13375318-13375655
Length = 217
Score = 27.1 bits (57), Expect = 2.1
Identities = 8/20 (40%), Positives = 15/20 (75%)
Frame = -3
Query: 87 VSAGKRHHRCNCYYVSEHHL 28
+S K+H +C+ ++VSE H+
Sbjct: 39 ISNAKKHEQCDLFHVSESHI 58
>10_08_0917 -
21550332-21550685,21550726-21550765,21551766-21551767,
21552094-21552633
Length = 311
Score = 26.6 bits (56), Expect = 2.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 144 ISSVPWDHVEARARRCSGGVSAG 76
+SS+P DH A A +GG+S G
Sbjct: 206 VSSIPKDHAAAAAVVANGGLSGG 228
>10_03_0046 + 7357777-7357992
Length = 71
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -3
Query: 186 DSCSDGVRRWYCLNISSVPWDHVEARARRCSGGVSAG 76
D DG+RRW+C S + V R GG G
Sbjct: 23 DGGGDGLRRWWCRPASGRSTERVSGREVGGFGGGEGG 59
>07_03_0730 + 21030123-21030338
Length = 71
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -3
Query: 186 DSCSDGVRRWYCLNISSVPWDHVEARARRCSGGVSAG 76
D DG+RRW+C S + V R GG G
Sbjct: 23 DGGGDGLRRWWCRPASGRSTERVSGREVGGFGGGEGG 59
>06_03_0934 -
26073084-26073220,26073296-26073345,26073465-26073634,
26073651-26073803,26073877-26074032,26074227-26074350,
26075066-26075178,26076336-26076469,26077391-26077578,
26077718-26078139
Length = 548
Score = 26.6 bits (56), Expect = 2.8
Identities = 12/55 (21%), Positives = 23/55 (41%)
Frame = -3
Query: 222 NHVNGMTSFYRADSCSDGVRRWYCLNISSVPWDHVEARARRCSGGVSAGKRHHRC 58
+++ +SFY A S + C ++ WD ++ R +G + K C
Sbjct: 231 DYITPWSSFYEAVSQDYKSESFNCFSVIKAAWDLIDERGSTDAGLLQLSKTFRAC 285
>05_05_0287 + 23868503-23869045
Length = 180
Score = 26.6 bits (56), Expect = 2.8
Identities = 16/48 (33%), Positives = 19/48 (39%)
Frame = -3
Query: 240 GCFAADNHVNGMTSFYRADSCSDGVRRWYCLNISSVPWDHVEARARRC 97
G +D G+ S Y A + G V WD V RARRC
Sbjct: 32 GGLVSDLDAAGVASSYYAPFAAAGAGAAIAAVAGVVAWDAVGHRARRC 79
>02_01_0729 -
5465521-5466005,5466481-5466793,5466878-5467094,
5467797-5468116
Length = 444
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Frame = +1
Query: 127 PGHAADVQTVPAPY-TITTAVSSVKAGHSIDVVISGK 234
P AADV VP P ++ T+V++V AGH + +S +
Sbjct: 50 PAPAADVY-VPTPVPSLPTSVAAVAAGHYHSLAVSAE 85
>01_06_1064 + 34237919-34238155
Length = 78
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/37 (35%), Positives = 16/37 (43%)
Frame = -3
Query: 186 DSCSDGVRRWYCLNISSVPWDHVEARARRCSGGVSAG 76
D DG+RRW+C S + V R GG G
Sbjct: 23 DGGGDGLRRWWCRPASGRSTERVSGREVGGFGGGEGG 59
>10_07_0059 + 12475452-12475785,12475889-12476523
Length = 322
Score = 26.2 bits (55), Expect = 3.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 6 DLPEIYRKDDVHLRSSSCIGGGAYQRL 86
D PE++ DVH +S GGAY+ L
Sbjct: 260 DDPEVFDPYDVHGGLASYFAGGAYESL 286
>08_02_0350 + 16123139-16124041
Length = 300
Score = 26.2 bits (55), Expect = 3.7
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +1
Query: 91 TGAPPSACFDMIPGHAADVQTVPAPYTITTAVSSVKAGHSIDVVISGKTPED 246
+G P FD + AA+V+ VP P + ++SS+ ++ V+ P+D
Sbjct: 107 SGEPAGFFFDELDALAAEVEVVPLPSRM--SLSSIGGLAAVAGVVLPSLPDD 156
>02_01_0521 +
3768072-3768239,3768280-3768337,3769197-3769659,
3769736-3769990,3770763-3770934,3772260-3772910,
3773659-3774045,3774123-3774155,3774239-3774307,
3774388-3774463,3775135-3775223,3775442-3775615,
3775693-3775821
Length = 907
Score = 25.8 bits (54), Expect = 4.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -3
Query: 75 KRHHRCNCYYVSEHHLF 25
+R H CNC ++ H LF
Sbjct: 529 RRIHHCNCNHIPRHTLF 545
>01_06_0495 - 29779499-29781325
Length = 608
Score = 25.8 bits (54), Expect = 4.9
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 97 APPSACFDMIPGHAAD-VQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEA 273
APPS + +P H A ++T P ++ A +S A H D V P + G L+ A
Sbjct: 3 APPSLPYRHLPQHLAGLLKTRPLHDLLSDASTSRAARHLFDAV---PRPTPALCGTLISA 59
>12_02_1199 + 26928685-26929671
Length = 328
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/42 (35%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 157 PAPYTITTAVSSVKAGHSIDVVISGK--TPEDKMAGILLEAR 276
P P T TTA +SV A + SG+ E+K+ G+ + R
Sbjct: 61 PTPPTTTTATASVAAADVETPLPSGREELEEEKVGGVAVRLR 102
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 25.4 bits (53), Expect = 6.5
Identities = 15/51 (29%), Positives = 20/51 (39%)
Frame = -3
Query: 210 GMTSFYRADSCSDGVRRWYCLNISSVPWDHVEARARRCSGGVSAGKRHHRC 58
G ++ S + R W L S W ++ RA RC V A RC
Sbjct: 74 GRLNYRDRASMAAACRTWRDLGASPCLWSALDLRAHRCDAEV-ASSLSSRC 123
>10_08_0295 - 16581014-16583071
Length = 685
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -3
Query: 261 DAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRW 157
D G F ++AD HV+ ++R C +G+ ++
Sbjct: 100 DGGRFTITPWSADRHVHHPNWWFRVRLCLEGLPQY 134
>08_01_0554 - 4851698-4851943,4852041-4852760
Length = 321
Score = 25.4 bits (53), Expect = 6.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 100 PPSACFDMIPGHAADVQTVPAPYTITTAVSSVKAG 204
P +A D GH ++ TV + +TAV+ V AG
Sbjct: 253 PVAAGADSGGGHGGNLSTVVGIFAASTAVTMVAAG 287
>05_05_0253 - 23632907-23633646,23633758-23635050,23636471-23636663
Length = 741
Score = 25.4 bits (53), Expect = 6.5
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -3
Query: 261 DAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRW 157
D G F ++AD HV+ ++R C +G+ ++
Sbjct: 450 DGGRFTITPWSADRHVHHPNWWFRVRLCLEGLPQY 484
>10_05_0020 - 8094412-8094653,8094692-8095017,8095632-8095798
Length = 244
Score = 25.0 bits (52), Expect = 8.6
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -3
Query: 126 DHVEARARRCSGGVSAGKR 70
D EA A RC G +AG+R
Sbjct: 187 DRAEATAARCPGWAAAGRR 205
>04_03_0589 -
17604361-17604800,17604887-17604949,17605025-17605280,
17605373-17605634,17605739-17605885,17606118-17606236,
17606373-17606531,17606911-17606947,17607023-17607174
Length = 544
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/18 (61%), Positives = 13/18 (72%)
Frame = -3
Query: 126 DHVEARARRCSGGVSAGK 73
DHV A+ARR G SAG+
Sbjct: 525 DHVRAQARRTKRGRSAGQ 542
>03_05_0611 + 26113798-26114261,26114451-26114597,26114784-26115405
Length = 410
Score = 25.0 bits (52), Expect = 8.6
Identities = 11/21 (52%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = +2
Query: 62 RWW-RLPALTPPEHRLARAST 121
RWW RLP PP + R ST
Sbjct: 118 RWWARLPPRPPPREDMERWST 138
>01_06_1435 + 37351653-37351990,37352241-37352424
Length = 173
Score = 25.0 bits (52), Expect = 8.6
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 129 WDHVEARARRCSGGVSAGKRHHRCNCYYVSEHHLF 25
WD + RR GG G+ R + EH LF
Sbjct: 81 WDDNDGNDRRGGGGKPRGEERRRGVPWSEDEHRLF 115
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.316 0.130 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,411,243
Number of Sequences: 37544
Number of extensions: 190800
Number of successful extensions: 565
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 559
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 565
length of database: 14,793,348
effective HSP length: 70
effective length of database: 12,165,268
effective search space used: 267635896
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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