Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_B01
(278 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036702-7|AAB88372.1| 360|Caenorhabditis elegans Hypothetical ... 28 0.86
Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical pr... 28 1.1
Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical p... 27 2.0
Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical pr... 27 2.0
AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein. 27 2.0
AF016685-10|AAG24143.2| 195|Caenorhabditis elegans Hypothetical... 27 2.0
Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical pr... 26 4.6
Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical pr... 26 4.6
Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical pr... 26 4.6
Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical pr... 26 4.6
AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein. 26 4.6
>AF036702-7|AAB88372.1| 360|Caenorhabditis elegans Hypothetical
protein F33D4.4 protein.
Length = 360
Score = 28.3 bits (60), Expect = 0.86
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -3
Query: 93 GGVSAGKRHHRCNCYYVSEHHLFYKFQ 13
GG+ G H C ++VSEH++F K Q
Sbjct: 215 GGLVLGMGLHPCAGHFVSEHYVFKKDQ 241
>Z69902-9|CAH10779.1| 4061|Caenorhabditis elegans Hypothetical protein
C47D12.1b protein.
Length = 4061
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Frame = -3
Query: 261 DAGHFVFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 136
D VF C A+++++NG+ S R + +D +R+ C+++ S
Sbjct: 4000 DCDKSVFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4042
>Z69902-10|CAI59119.1| 4053|Caenorhabditis elegans Hypothetical
protein C47D12.1c protein.
Length = 4053
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 246 VFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 136
VF C A+++++NG+ S R + +D +R+ C+++ S
Sbjct: 3997 VFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4034
>Z69902-8|CAA93765.2| 4064|Caenorhabditis elegans Hypothetical protein
C47D12.1a protein.
Length = 4064
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 246 VFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 136
VF C A+++++NG+ S R + +D +R+ C+++ S
Sbjct: 4008 VFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4045
>AY551966-1|AAS65430.1| 4064|Caenorhabditis elegans TRR-1 protein.
Length = 4064
Score = 27.1 bits (57), Expect = 2.0
Identities = 12/38 (31%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Frame = -3
Query: 246 VFGCFAADNHVNGMTSFYRADSCSDG-VRRWYCLNISS 136
VF C A+++++NG+ S R + +D +R+ C+++ S
Sbjct: 4008 VFACHASNSYINGVASKLRNTNSADAKLRKDDCVSLIS 4045
>AF016685-10|AAG24143.2| 195|Caenorhabditis elegans Hypothetical
protein F59E11.7a protein.
Length = 195
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 3 DDLPEIYRKDDVHLRSSSCIG 65
DD+ Y K+ +LRSS CIG
Sbjct: 170 DDMTRRYEKEAANLRSSICIG 190
>Z69662-9|CAA93507.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 25.8 bits (54), Expect = 4.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 103 PSACFDMIPGHAADVQTVPAPYT-ITTAVSSVKAGHSID 216
P DMIPG+ A+ +TV I TA++ A SID
Sbjct: 325 PENILDMIPGNLAERRTVLGELNWIFTAITDTIAFTSID 363
>Z69662-8|CAA93506.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 25.8 bits (54), Expect = 4.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 103 PSACFDMIPGHAADVQTVPAPYT-ITTAVSSVKAGHSID 216
P DMIPG+ A+ +TV I TA++ A SID
Sbjct: 325 PENILDMIPGNLAERRTVLGELNWIFTAITDTIAFTSID 363
>Z68214-8|CAA92449.2| 1782|Caenorhabditis elegans Hypothetical
protein C10C5.6b protein.
Length = 1782
Score = 25.8 bits (54), Expect = 4.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 103 PSACFDMIPGHAADVQTVPAPYT-ITTAVSSVKAGHSID 216
P DMIPG+ A+ +TV I TA++ A SID
Sbjct: 325 PENILDMIPGNLAERRTVLGELNWIFTAITDTIAFTSID 363
>Z68214-7|CAA92448.2| 1776|Caenorhabditis elegans Hypothetical
protein C10C5.6a protein.
Length = 1776
Score = 25.8 bits (54), Expect = 4.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 103 PSACFDMIPGHAADVQTVPAPYT-ITTAVSSVKAGHSID 216
P DMIPG+ A+ +TV I TA++ A SID
Sbjct: 325 PENILDMIPGNLAERRTVLGELNWIFTAITDTIAFTSID 363
>AY396716-1|AAR29589.1| 1800|Caenorhabditis elegans DAF-15 protein.
Length = 1800
Score = 25.8 bits (54), Expect = 4.6
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +1
Query: 103 PSACFDMIPGHAADVQTVPAPYT-ITTAVSSVKAGHSID 216
P DMIPG+ A+ +TV I TA++ A SID
Sbjct: 349 PENILDMIPGNLAERRTVLGELNWIFTAITDTIAFTSID 387
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.130 0.375
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,108,458
Number of Sequences: 27780
Number of extensions: 135695
Number of successful extensions: 339
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 330
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 248937694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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