Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_A24
         (108 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    19   4.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    19   4.2  
AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex det...    19   5.6  
AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc fi...    19   5.6  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 69   SYSILTHIQD*HNSGNELS 13
            S SIL H +  HN G  L+
Sbjct: 1417 SSSILLHWKSGHNGGASLT 1435


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 19.4 bits (38), Expect = 4.2
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 69   SYSILTHIQD*HNSGNELS 13
            S SIL H +  HN G  L+
Sbjct: 1413 SSSILLHWKSGHNGGASLT 1431


>AY352277-1|AAQ67418.1|  418|Apis mellifera complementary sex
          determiner protein.
          Length = 418

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 5/11 (45%), Positives = 9/11 (81%)
 Frame = -3

Query: 73 IFL*YSHTHSR 41
          +++ YSHTH +
Sbjct: 66 LYIKYSHTHEK 76


>AB208108-1|BAE72140.1|   92|Apis mellifera Broad complex zinc
          finger domain-Z3 isoform protein.
          Length = 92

 Score = 19.0 bits (37), Expect = 5.6
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -1

Query: 66 YSILTHIQD*HNSGNEL 16
          YS+  H QD H   + L
Sbjct: 19 YSLKRHFQDKHEQSDTL 35


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,151
Number of Sequences: 438
Number of extensions: 217
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 16
effective length of database: 139,335
effective search space used:  2647365
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)