Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_A18
         (259 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    25   0.11 
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   2.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   2.4  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    21   3.2  
AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.     21   3.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   4.3  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   5.6  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    19   9.8  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           19   9.8  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    19   9.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    19   9.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 25.4 bits (53), Expect = 0.11
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +1

Query: 112 YYTPERNPKEADYTAPIYAPQN 177
           Y+  E++PK+   T P  APQN
Sbjct: 302 YFRAEKDPKKMPCTQPPSAPQN 323


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +2

Query: 5   ICS*LSAFCQT*IAPFTLTS 64
           IC+ L+A CQ  +  F +TS
Sbjct: 644 ICTKLTADCQPGVTAFIVTS 663


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.0 bits (42), Expect = 2.4
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -1

Query: 202 RRRFVEDRGSAVRKSVQCSPPLWGYVQVY 116
           R+ + EDR   +R+      P +   QVY
Sbjct: 14  RQVYGEDRWEEIRRQASVEQPSFSVHQVY 42


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 20.6 bits (41), Expect = 3.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 85  DIVNIQAFDYYTPERNP 135
           D+V    FD+Y PE  P
Sbjct: 337 DMVGRSLFDFYHPEDLP 353


>AB050744-1|BAB17753.1|  238|Apis mellifera period protein protein.
          Length = 238

 Score = 20.6 bits (41), Expect = 3.2
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 85  DIVNIQAFDYYTPERNP 135
           D+V    FD+Y PE  P
Sbjct: 43  DMVGRSLFDFYHPEDLP 59


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.2 bits (40), Expect = 4.3
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -1

Query: 244 CG*AHHFESS 215
           C   HHFESS
Sbjct: 73  CSDVHHFESS 82


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 19.8 bits (39), Expect = 5.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -2

Query: 78  VYDAWDVKVNGAIYVW 31
           V+++W   + GAI  W
Sbjct: 472 VWNSWMPSIRGAIQQW 487


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 213 LLDSKWCAYPQTCP 254
           L+D+ W  YP   P
Sbjct: 36  LIDANWYQYPPLNP 49


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +1

Query: 109 DYYTPERNPKEADY 150
           DY+ P   P+  DY
Sbjct: 420 DYFMPIGRPRAKDY 433


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 6/14 (42%), Positives = 8/14 (57%)
 Frame = +3

Query: 213 LLDSKWCAYPQTCP 254
           L+D+ W  YP   P
Sbjct: 2   LIDANWYQYPPLNP 15


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.0 bits (37), Expect = 9.8
 Identities = 5/11 (45%), Positives = 11/11 (100%)
 Frame = -2

Query: 231 TILNPVIYSSV 199
           ++LNP+IY+++
Sbjct: 420 SLLNPIIYATL 430


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.317    0.136    0.409 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,812
Number of Sequences: 438
Number of extensions: 1070
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  4636803
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.8 bits)