Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_A17
(439 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 29 0.41
SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase Ubp12|Schizo... 27 0.96
SPBC25H2.03 |||vacuolar protein involved in phosphoinositide met... 27 1.3
SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr... 26 2.9
SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual 26 2.9
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac... 26 2.9
SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1 |Sc... 25 3.9
SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr ... 25 5.1
SPBC15D4.01c ||SPBC2D10.21c|kinesin-like protein|Schizosaccharom... 25 5.1
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 25 5.1
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 25 6.7
SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces... 25 6.7
SPAC16A10.03c |||zinc finger protein Pep5/Vps11 |Schizosaccharom... 25 6.7
SPBP4H10.04 |ppb1||calcineurin catalytic subunit Ppb1|Schizosacc... 25 6.7
SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces ... 24 8.9
SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual 24 8.9
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 24 8.9
SPAC1782.05 |||phosphotyrosyl phosphatase activator homolog|Schi... 24 8.9
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 28.7 bits (61), Expect = 0.41
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Frame = +3
Query: 201 YEFVTPLTSLVVVKPNE--TNAVNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLP 374
Y + + + +V+ N+ T+ + E ++PA +++ S+P Y IS+ R T+ L SLP
Sbjct: 483 YGHTSTIRCIKIVQGNQSTTDTDDVEKENRPASNDAN--SMPPYIISSSRDCTIRLWSLP 540
>SPCC1494.05c |ubp12||ubiquitin C-terminal hydrolase
Ubp12|Schizosaccharomyces pombe|chr 3|||Manual
Length = 979
Score = 27.5 bits (58), Expect = 0.96
Identities = 13/46 (28%), Positives = 26/46 (56%)
Frame = +3
Query: 201 YEFVTPLTSLVVVKPNETNAVNAESVDKPAFQESSFASVPVYDISN 338
Y F+T L+ ++++ +E + + +++P S VPVY IS+
Sbjct: 558 YRFLTQLSKSLLMEISEEDEIYLYELERPYEDGSDDILVPVYHISD 603
>SPBC25H2.03 |||vacuolar protein involved in phosphoinositide
metabolism|Schizosaccharomyces pombe|chr 2|||Manual
Length = 811
Score = 27.1 bits (57), Expect = 1.3
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = -2
Query: 321 QGPMQTKILEKPVYQQIPRSLHSFHLVSLLPKTSE 217
+GP+ + I + PV +H+F L L+P SE
Sbjct: 177 EGPVSSSIQDVPVMSTEQPRMHTFSLSELVPLLSE 211
>SPBC3H7.02 |||sulfate transporter |Schizosaccharomyces pombe|chr
2|||Manual
Length = 877
Score = 25.8 bits (54), Expect = 2.9
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +3
Query: 195 LKYEFVTPLTSLVVVKPNETNAVNAESVDKPAFQESSFASVPVYDI----SNVRPGTVAL 362
L Y+F+ +T VV P + ++ SSF V +Y I +V G VA+
Sbjct: 134 LVYDFIAGITVGCVVVPQGMSYAKVATLPAQYGLYSSFVGVAIYCIFATSKDVSIGPVAV 193
Query: 363 QSLPSPQLTAD 395
SL + ++ A+
Sbjct: 194 MSLVTSKVIAN 204
>SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.8 bits (54), Expect = 2.9
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -1
Query: 385 NCGLGSDCRATVPGLTLEISYTGTD 311
NC + + G+TLE++Y TD
Sbjct: 412 NCSSEEEAQQVASGVTLEVAYESTD 436
>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.8 bits (54), Expect = 2.9
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 324 YDISNVRPGTVALQSLPSPQL 386
Y NVR ++ LQSLP+P L
Sbjct: 443 YSTDNVRTDSLDLQSLPTPTL 463
>SPBC29A10.04 |psm1|smc1|mitotic cohesin complex subunit Psm1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1233
Score = 25.4 bits (53), Expect = 3.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +3
Query: 270 ESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPS 377
E +D P +E S S+P+ D+SN G + + PS
Sbjct: 941 EDIDVP-LREGSLTSIPIDDVSN--SGDITMGEEPS 973
>SPAC26F1.08c |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 977
Score = 25.0 bits (52), Expect = 5.1
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = -3
Query: 356 YGSWSNVGNIIYRDRCKRRFLKSRFINRFRVHCIRFI 246
Y + V NI + +LK+ I+ F + CIRFI
Sbjct: 682 YSGIATVFNITFPPILYGSYLKTSTISPFHLACIRFI 718
>SPBC15D4.01c ||SPBC2D10.21c|kinesin-like
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 633
Score = 25.0 bits (52), Expect = 5.1
Identities = 13/52 (25%), Positives = 25/52 (48%)
Frame = -2
Query: 261 LHSFHLVSLLPKTSEV*QIHTSELTLKLSFQDCFPYSCLRREYQRHLFRPII 106
L+ + ++ P+ S ++ S+ K SF FP SC + + + P+I
Sbjct: 27 LNDYEILLESPEDSHAYRVSKSKTLEKASFTKVFPPSCTQLDVFSTICAPLI 78
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 25.0 bits (52), Expect = 5.1
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 261 VNAESVDKPAFQESSFASVPVYDISNVRPGTVALQSLPSPQLTADTS 401
V+ +D P+ E+ F+ + V + +V + + PSP L++ S
Sbjct: 297 VDTPGIDAPSDLEAKFSDLGVSSVVSVTSPLQSCTNSPSPPLSSPAS 343
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 24.6 bits (51), Expect = 6.7
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 58 CFSTGTGTFSFLSKCLLVY 2
C TGTG SKC+ +Y
Sbjct: 684 CLQTGTGVKPDTSKCVAIY 702
>SPAC12G12.03 |cip2||RNA-binding protein Cip2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 576
Score = 24.6 bits (51), Expect = 6.7
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 192 ALKYEFVTPLTSLVVVKPNETNAVNAESVDKPAFQESSFASV 317
A E TP +L V P + NA N+ + + FAS+
Sbjct: 519 ATPLELATPFANLNVSSPLDRNATNSSNTLNGSAMNDYFASL 560
>SPAC16A10.03c |||zinc finger protein Pep5/Vps11
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 860
Score = 24.6 bits (51), Expect = 6.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 364 NHSQVRN*PQILRTNTNHYLYL 429
NH QV N P++LRT+ + ++L
Sbjct: 512 NHLQVCNLPELLRTSNSFGIWL 533
>SPBP4H10.04 |ppb1||calcineurin catalytic subunit
Ppb1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 554
Score = 24.6 bits (51), Expect = 6.7
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -2
Query: 126 HLFRPIIVLLLDTPRDAPMGSFHVFLQERGPSVS 25
H IV + AP F +F+QE G SVS
Sbjct: 6 HNLEDPIVRAIRQKNQAPSHDFTIFVQEDGSSVS 39
>SPAC144.07c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 315
Score = 24.2 bits (50), Expect = 8.9
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +1
Query: 289 LFKNLRLHRSLYMIFPTLDQEP*LCNHSQVR 381
L K L+ HR Y+IF Q NH+ ++
Sbjct: 88 LLKELKKHRDSYVIFDCPGQVELFTNHNSLQ 118
>SPAC18B11.05 |gpi18||pig-V|Schizosaccharomyces pombe|chr 1|||Manual
Length = 426
Score = 24.2 bits (50), Expect = 8.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -3
Query: 299 FLKSRFINRFRVHCIRFIWFHY 234
+ KSR + F HCI F+W Y
Sbjct: 391 YAKSRNLKAFG-HCILFVWIVY 411
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 24.2 bits (50), Expect = 8.9
Identities = 9/30 (30%), Positives = 20/30 (66%)
Frame = -2
Query: 378 DLGVIAELRFLV*RWKYHIQGPMQTKILEK 289
+ G + L+ + + ++H+Q ++TKIL+K
Sbjct: 720 ETGKLVALKIIRNKKRFHMQALVETKILQK 749
>SPAC1782.05 |||phosphotyrosyl phosphatase activator
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 352
Score = 24.2 bits (50), Expect = 8.9
Identities = 9/31 (29%), Positives = 19/31 (61%)
Frame = -2
Query: 300 ILEKPVYQQIPRSLHSFHLVSLLPKTSEV*Q 208
+ +KP+ IP+S H++++L + E+ Q
Sbjct: 46 VKDKPISASIPQSSSIEHVLNILDRVGEIKQ 76
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,796,463
Number of Sequences: 5004
Number of extensions: 34180
Number of successful extensions: 114
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 114
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 158122380
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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