BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_A16
(416 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF127926-1|AAD26361.1| 376|Drosophila melanogaster odorant rece... 27 10.0
AE013599-319|AAF59280.1| 376|Drosophila melanogaster CG1854-PA ... 27 10.0
>AF127926-1|AAD26361.1| 376|Drosophila melanogaster odorant
receptor DOR87 protein.
Length = 376
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 303 IFNIVNKSTDLWSQRIFKLAETVARKYPLLTSYVGSIDI 187
+F+ + STD W + I + AE AR +L +DI
Sbjct: 97 LFHSILDSTDEWGRGILRRAEREARNLAILNLSASFLDI 135
>AE013599-319|AAF59280.1| 376|Drosophila melanogaster CG1854-PA
protein.
Length = 376
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -3
Query: 303 IFNIVNKSTDLWSQRIFKLAETVARKYPLLTSYVGSIDI 187
+F+ + STD W + I + AE AR +L +DI
Sbjct: 97 LFHSILDSTDEWGRGILRRAEREARNLAILNLSASFLDI 135
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,671,872
Number of Sequences: 53049
Number of extensions: 320047
Number of successful extensions: 589
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -