Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_A16
(416 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical ... 27 4.1
AL110478-4|CAB54346.1| 546|Caenorhabditis elegans Hypothetical ... 27 5.5
Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81492-9|CAB04026.2| 805|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z37092-4|CAA85455.1| 890|Caenorhabditis elegans Hypothetical pr... 27 7.2
U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic nucleoti... 27 7.2
L23645-10|AAK26135.2| 300|Caenorhabditis elegans Hypothetical p... 27 7.2
Z81594-2|CAB04746.1| 416|Caenorhabditis elegans Hypothetical pr... 26 9.5
U97015-1|AAB52347.1| 104|Caenorhabditis elegans Hypothetical pr... 26 9.5
AC006757-2|AAF60543.1| 416|Caenorhabditis elegans Hypothetical ... 26 9.5
>AL021497-8|CAA16409.1| 334|Caenorhabditis elegans Hypothetical
protein Y51A2D.12 protein.
Length = 334
Score = 27.5 bits (58), Expect = 4.1
Identities = 14/59 (23%), Positives = 30/59 (50%)
Frame = -3
Query: 411 YIDTSYAYNLLTHLLKKLSFYVS*YIYIFLKFA*KQIFNIVNKSTDLWSQRIFKLAETV 235
YIDT+Y + + + L +++ + +F A +++N+ K + +F +A TV
Sbjct: 171 YIDTTYGRSNIYYFLMPALIFLTCFNIVFNVLAGIRLYNMKKKGVKVPETSLFSMAFTV 229
>AL110478-4|CAB54346.1| 546|Caenorhabditis elegans Hypothetical
protein Y26D4A.10 protein.
Length = 546
Score = 27.1 bits (57), Expect = 5.5
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -1
Query: 344 HNIYIYF*NLPENRFSILSINPQIYGRNVYLN 249
HN+ +Y PEN+ SI S NPQ + + +N
Sbjct: 182 HNLSLY--RSPENKNSITSSNPQNFTAKMVIN 211
>Z93778-7|CAB07847.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 60 YFSYIFLINV-FLLDYFCFVLI*NHNYKLPYNYCHWF 167
Y +++ L+ + FL + FC L ++ Y+ N+ +WF
Sbjct: 221 YMTWLSLVTLCFLFNAFCIPLRSSYPYQTADNWMYWF 257
>Z81532-9|CAB04328.1| 800|Caenorhabditis elegans Hypothetical
protein F36F2.5 protein.
Length = 800
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 60 YFSYIFLINV-FLLDYFCFVLI*NHNYKLPYNYCHWF 167
Y +++ L+ + FL + FC L ++ Y+ N+ +WF
Sbjct: 221 YMTWLSLVTLCFLFNAFCIPLRSSYPYQTADNWMYWF 257
>Z81492-9|CAB04026.2| 805|Caenorhabditis elegans Hypothetical
protein E03H4.4 protein.
Length = 805
Score = 26.6 bits (56), Expect = 7.2
Identities = 24/85 (28%), Positives = 37/85 (43%)
Frame = -3
Query: 390 YNLLTHLLKKLSFYVS*YIYIFLKFA*KQIFNIVNKSTDLWSQRIFKLAETVARKYPLLT 211
Y+ + HL L+ Y + + I+ + A K+I V STDL +K + +KY
Sbjct: 607 YSRVHHLTGSLNIYNTYFTGIYGEPAAKKILATVKDSTDLKVLETWKKFDDGLKKY---- 662
Query: 210 SYVGSIDIHMQVDFETNGNNYMGVY 136
+Y D V T G +Y Y
Sbjct: 663 AYNNITDGAEAVLLSTYGKSYSDFY 687
>Z37092-4|CAA85455.1| 890|Caenorhabditis elegans Hypothetical
protein F44F4.4 protein.
Length = 890
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/29 (37%), Positives = 19/29 (65%)
Frame = -3
Query: 297 NIVNKSTDLWSQRIFKLAETVARKYPLLT 211
N ++ T +W+ +K+ TVAR YP++T
Sbjct: 5 NETSRVTRIWNSLSYKIGSTVAR-YPVIT 32
>U73476-1|AAB41492.1| 800|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 800
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/37 (29%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = +3
Query: 60 YFSYIFLINV-FLLDYFCFVLI*NHNYKLPYNYCHWF 167
Y +++ L+ + FL + FC L ++ Y+ N+ +WF
Sbjct: 221 YMTWLSLVTLCFLFNAFCIPLRSSYPYQTADNWMYWF 257
>L23645-10|AAK26135.2| 300|Caenorhabditis elegans Hypothetical
protein F54F2.9 protein.
Length = 300
Score = 26.6 bits (56), Expect = 7.2
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -3
Query: 309 KQIFNIVNKSTDLWSQRIFKLAETVARKYP 220
+Q + KS D WSQ K ET +KYP
Sbjct: 230 QQSVPVEEKSEDDWSQAEQKAFETALQKYP 259
>Z81594-2|CAB04746.1| 416|Caenorhabditis elegans Hypothetical
protein T20F10.4 protein.
Length = 416
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 344 HNIYIYF*NLPENRFSILSINPQIYGRNVYLN 249
HN+ +Y PEN+ SI+S +PQ + + +N
Sbjct: 182 HNLSLY--RSPENKNSIISSDPQRFTAKMVIN 211
>U97015-1|AAB52347.1| 104|Caenorhabditis elegans Hypothetical
protein F48C1.4 protein.
Length = 104
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 409 YRHFLRL*SFNSSFKEIEFLCFIIYIYISEICLKT 305
+ HFLR+ N K + LC I+ Y CL T
Sbjct: 52 HHHFLRVLFCNKIRKSLIPLCLFIFAYYFLACLTT 86
>AC006757-2|AAF60543.1| 416|Caenorhabditis elegans Hypothetical
protein Y40C7B.3 protein.
Length = 416
Score = 26.2 bits (55), Expect = 9.5
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = -1
Query: 344 HNIYIYF*NLPENRFSILSINPQIYGRNVYLN 249
HN+ +Y PEN+ SI+S +PQ + + +N
Sbjct: 182 HNLSLY--RSPENKNSIISSDPQRFTAKMVIN 211
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,936,442
Number of Sequences: 27780
Number of extensions: 181796
Number of successful extensions: 479
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 479
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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