Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_A14
         (668 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0886 + 32725504-32725824,32725905-32726658,32727911-327280...    29   4.4  
01_06_0534 + 30057933-30058290,30058472-30059454                       28   7.7  

>01_06_0886 +
           32725504-32725824,32725905-32726658,32727911-32728033,
           32729477-32729535,32731427-32731732,32732006-32732236,
           32732332-32732484,32732567-32732836
          Length = 738

 Score = 28.7 bits (61), Expect = 4.4
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 369 ECWQQITTIMQLFTRANTARLSTSIFCTYGFYP 467
           + W+ I ++M +   A TA LS S  C++  YP
Sbjct: 420 DIWRHIHSLMPMRDAARTACLSHSFLCSWRCYP 452


>01_06_0534 + 30057933-30058290,30058472-30059454
          Length = 446

 Score = 27.9 bits (59), Expect = 7.7
 Identities = 9/27 (33%), Positives = 22/27 (81%)
 Frame = -3

Query: 381 VANTLNGYFLV*SLLGALLNTNVTSKF 301
           +A+ +NG F+  +++G++L +N+T++F
Sbjct: 294 IADLVNGSFMESNVVGSILRSNITAQF 320


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,117,870
Number of Sequences: 37544
Number of extensions: 286859
Number of successful extensions: 634
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 634
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)