Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_A13
         (546 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              25   0.38 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         21   8.2  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   8.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   8.2  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    21   8.2  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    21   8.2  

>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 25.4 bits (53), Expect = 0.38
 Identities = 13/43 (30%), Positives = 19/43 (44%)
 Frame = -3

Query: 451 QVYRRVSSLXESTGEISCSLPRLEICPLVRRYV*IADHESYTP 323
           + Y R   L ++ G +SC + R   CP+      IA    Y P
Sbjct: 50  EAYYRKHLLKDADGRVSCPVLRAYTCPICGACGDIAHTVKYCP 92


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 459 VVCRSTVG*VLXRRAQVKFPAVYRVWKY 376
           +VC+ T G +L   +  K   +   WK+
Sbjct: 12  IVCQGTTGNILRGESLNKSLPILHEWKF 39


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = +3

Query: 102 WQPHGW 119
           W PHGW
Sbjct: 178 WTPHGW 183


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 393 RLQEISPVLSXREL 434
           RLQE SP+L  R+L
Sbjct: 226 RLQENSPLLDLRQL 239


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 459 VVCRSTVG*VLXRRAQVKFPAVYRVWKY 376
           +VC+ T G +L   +  K   +   WK+
Sbjct: 12  IVCQGTTGNILRGESLNKSLPILHEWKF 39


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 8/28 (28%), Positives = 14/28 (50%)
 Frame = -1

Query: 459 VVCRSTVG*VLXRRAQVKFPAVYRVWKY 376
           +VC+ T G +L   +  K   +   WK+
Sbjct: 12  IVCQGTTGNILRGESLNKSLPILHEWKF 39


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,992
Number of Sequences: 438
Number of extensions: 3531
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15581757
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)