Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_A10
         (551 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   2.7  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    22   3.6  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    22   3.6  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    22   3.6  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    22   3.6  
DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    22   4.8  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    22   4.8  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    22   4.8  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    22   4.8  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    22   4.8  
DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex det...    21   6.3  
DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex det...    21   6.3  
DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex det...    21   6.3  
AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex det...    21   6.3  

>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 2.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -1

Query: 479 FQNYNSL*NISQNIQSCKKNY*FIPKTILANKNYI 375
           + NYN+  N   N  +   NY    K +  N NYI
Sbjct: 324 YSNYNNYNNNYNNYNNYNNNYNNNYKKLYYNINYI 358


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + IPI
Sbjct: 318 YKKLQYYNINYIEQIPVPVPIPI 340


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + IPI
Sbjct: 329 YKKLQYYNINYIEQIPVPVPIPI 351


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + IPI
Sbjct: 329 YKKLQYYNINYIEQIPVPVPIPI 351


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + IPI
Sbjct: 318 YKKLQYYNINYIEQIPVPVPIPI 340


>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + +PI
Sbjct: 107 YKKLQYYNINYIEQIPIPVPVPI 129


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + +PI
Sbjct: 107 YKKLQYYNINYIEQIPIPVPVPI 129


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + +PI
Sbjct: 107 YKKLQYYNINYIEQIPIPVPVPI 129


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + +PI
Sbjct: 107 YKKLQYYNINYIEQIPIPVPVPI 129


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 21.8 bits (44), Expect = 4.8
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + IP+
Sbjct: 97  YKKLQYYNINYIEQIPVPVPIPV 119


>DQ325109-1|ABD14123.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + +P+
Sbjct: 97  YKKLQYYNINYIEQIPVPVPVPV 119


>DQ325108-1|ABD14122.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + +P+
Sbjct: 97  YKKLQYYNINYIEQIPVPVPVPV 119


>DQ325106-1|ABD14120.1|  177|Apis mellifera complementary sex
           determiner protein.
          Length = 177

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + +P+
Sbjct: 97  YKKLQYYNINYIEQIPVPVPVPV 119


>AY350615-1|AAQ57657.1|  410|Apis mellifera complementary sex
           determiner protein.
          Length = 410

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = +3

Query: 483 HNKMQYDYLLFLPQFPYGISIPI 551
           + K+QY  + ++ Q P  + +P+
Sbjct: 330 YKKLQYYNINYIEQIPVPVPVPV 352


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,022
Number of Sequences: 438
Number of extensions: 3063
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 15827139
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)