Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_A08
(603 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83235-1|CAB05775.1| 174|Caenorhabditis elegans Hypothetical pr... 38 0.006
AC006661-9|AAF39885.1| 337|Caenorhabditis elegans Hypothetical ... 29 1.9
AF016661-1|AAB66049.2| 514|Caenorhabditis elegans Hypothetical ... 28 4.5
Z35598-4|CAA84653.1| 488|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 27 7.8
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 27 7.8
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 27 7.8
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 27 7.8
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 27 7.8
AF077539-1|AAK84580.2| 550|Caenorhabditis elegans Hypothetical ... 27 7.8
>Z83235-1|CAB05775.1| 174|Caenorhabditis elegans Hypothetical
protein K10C3.2 protein.
Length = 174
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 227 AVLGRGPAGH-SAFLQKRLAKGQKFFDSGDYQMAKQRPG 340
A G+ PA S+FLQK+L + +KFFDSGDY M K + G
Sbjct: 35 AATGKLPARPASSFLQKKLQQ-RKFFDSGDYAMDKSKAG 72
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/17 (76%), Positives = 13/17 (76%)
Frame = +2
Query: 401 IPTPDTVPIRKTSIIQP 451
IP PDTVP RK SII P
Sbjct: 133 IPRPDTVPQRKASIINP 149
>AC006661-9|AAF39885.1| 337|Caenorhabditis elegans Hypothetical
protein H20J04.7 protein.
Length = 337
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 335 VSVLPSDNHQSRRIFALWLAFFAKKQNG 252
+ +L N + +RIF LWL FF NG
Sbjct: 170 IGILGLRNFKIKRIFILWLGFFENPWNG 197
>AF016661-1|AAB66049.2| 514|Caenorhabditis elegans Hypothetical
protein F02E11.2 protein.
Length = 514
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = +2
Query: 440 IIQPKFSTPSQTS*LYLPSLVI--QFCRTSYFTFYFLLYILTEGDALRFYYAPIL 598
I P+ S +Y+P L I C S FTF+ L++ E L+F++ +L
Sbjct: 356 IFHPEISKKKLQKKVYIPYLFIIHSICFRSTFTFFRLIFPFFEFIFLKFHFKLLL 410
>Z35598-4|CAA84653.1| 488|Caenorhabditis elegans Hypothetical
protein F10F2.6 protein.
Length = 488
Score = 27.9 bits (59), Expect = 5.9
Identities = 17/59 (28%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -3
Query: 472 LTRCGELGLDDRSLANRDSVWCRNGVACWQLGWCSRCF-KWSRKVTRSLFCHLIITRVE 299
L+R GE GL+ S A ++C + ++ G CS F + R +CH +++ E
Sbjct: 273 LSRDGEKGLETMSDARYAPIYCEAILDEYEYGACSDGFSSYYRAALGIQWCHKLVSNKE 331
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 325 KTETW*PCGSI*STCCTIQAANRRRHSYTRHCPDSQDFYHPTQVLHTESDFLAVPP 492
K W PCG T T+ + N+ H R + + P+ L TE+D LA P
Sbjct: 2286 KDGIWVPCGRSGDTHFTVDSLNKGDHYKFR--VKAVNSEGPSDPLETETDILAKNP 2339
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 325 KTETW*PCGSI*STCCTIQAANRRRHSYTRHCPDSQDFYHPTQVLHTESDFLAVPP 492
K W PCG T T+ + N+ H R + + P+ L TE+D LA P
Sbjct: 2815 KDGIWVPCGRSGDTHFTVDSLNKGDHYKFR--VKAVNSEGPSDPLETETDILAKNP 2868
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 325 KTETW*PCGSI*STCCTIQAANRRRHSYTRHCPDSQDFYHPTQVLHTESDFLAVPP 492
K W PCG T T+ + N+ H R + + P+ L TE+D LA P
Sbjct: 2496 KDGIWVPCGRSGDTHFTVDSLNKGDHYKFR--VKAVNSEGPSDPLETETDILAKNP 2549
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 325 KTETW*PCGSI*STCCTIQAANRRRHSYTRHCPDSQDFYHPTQVLHTESDFLAVPP 492
K W PCG T T+ + N+ H R + + P+ L TE+D LA P
Sbjct: 2286 KDGIWVPCGRSGDTHFTVDSLNKGDHYKFR--VKAVNSEGPSDPLETETDILAKNP 2339
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 325 KTETW*PCGSI*STCCTIQAANRRRHSYTRHCPDSQDFYHPTQVLHTESDFLAVPP 492
K W PCG T T+ + N+ H R + + P+ L TE+D LA P
Sbjct: 2815 KDGIWVPCGRSGDTHFTVDSLNKGDHYKFR--VKAVNSEGPSDPLETETDILAKNP 2868
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 325 KTETW*PCGSI*STCCTIQAANRRRHSYTRHCPDSQDFYHPTQVLHTESDFLAVPP 492
K W PCG T T+ + N+ H R + + P+ L TE+D LA P
Sbjct: 2496 KDGIWVPCGRSGDTHFTVDSLNKGDHYKFR--VKAVNSEGPSDPLETETDILAKNP 2549
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 27.5 bits (58), Expect = 7.8
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +1
Query: 325 KTETW*PCGSI*STCCTIQAANRRRHSYTRHCPDSQDFYHPTQVLHTESDFLAVPP 492
K W PCG T T+ + N+ H R + + P+ L TE+D LA P
Sbjct: 1705 KDGIWVPCGRSGDTHFTVDSLNKGDHYKFR--VKAVNSEGPSDPLETETDILAKNP 1758
>AF077539-1|AAK84580.2| 550|Caenorhabditis elegans Hypothetical
protein T25D3.4 protein.
Length = 550
Score = 27.5 bits (58), Expect = 7.8
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +3
Query: 387 QQATPFLHQTLSRFARLLSSNPSSPH 464
++++P L + S ARLLSS+ SSPH
Sbjct: 524 RRSSPSLSRQSSDTARLLSSSDSSPH 549
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,319,294
Number of Sequences: 27780
Number of extensions: 258219
Number of successful extensions: 692
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 692
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -