Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0007_A05
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical... 136 1e-32
AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA ... 136 1e-32
Z93383-6|CAB07623.1| 283|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF036705-8|AAB95169.1| 685|Caenorhabditis elegans Hypothetical ... 29 3.8
AL032659-1|CAA21750.1| 298|Caenorhabditis elegans Hypothetical ... 28 6.6
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 27 8.7
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 27 8.7
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 27 8.7
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 27 8.7
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 27 8.7
>AL132876-15|CAD21668.2| 722|Caenorhabditis elegans Hypothetical
protein Y105E8A.19 protein.
Length = 722
Score = 136 bits (330), Expect = 1e-32
Identities = 67/101 (66%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Frame = +2
Query: 353 EEKKLLITRNLQEVLGDEKLTEILKT--RDLKIYWGTATTGRPHVAYFVPMSKIADFLKA 526
+E + LI RNLQE LG +KLT+ L+T + +YWGTATTG+PHV Y VPM KIADFL+A
Sbjct: 17 KETRELILRNLQESLGVDKLTKQLETPGKVPHVYWGTATTGKPHVGYLVPMRKIADFLQA 76
Query: 527 GCEVTILFADLHAYLDNMKAPWELLSLRTQYYEAAIKAMLQ 649
G +VTILFADLHAYLDNMK+ WELL R YYE IKA+LQ
Sbjct: 77 GLKVTILFADLHAYLDNMKSSWELLKCRVIYYENVIKALLQ 117
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 401 DEKLTEILKTRDLKIYWGTATTGRPHVAYFVPMSKIADFLKAG---CEVTILFADLHAYL 571
D L ++ + L + + GR H+ + P+ KI + AG TIL + L A+L
Sbjct: 392 DRVLADVSPQKPLHLMFIAPGKGRFHLGFIAPLLKIKEISDAGGVPVIATILVSPLEAFL 451
Query: 572 DNMKAPWELLSLRTQYYEAAIKAMLQ 649
DN K W + R Y+ ++++
Sbjct: 452 DNEKVAWAAIQSRAVYFREMFISLIK 477
>AB096636-1|BAC76736.1| 722|Caenorhabditis elegans tyrosyl-tRNA
synthetase (cytoplasmic)protein.
Length = 722
Score = 136 bits (330), Expect = 1e-32
Identities = 67/101 (66%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Frame = +2
Query: 353 EEKKLLITRNLQEVLGDEKLTEILKT--RDLKIYWGTATTGRPHVAYFVPMSKIADFLKA 526
+E + LI RNLQE LG +KLT+ L+T + +YWGTATTG+PHV Y VPM KIADFL+A
Sbjct: 17 KETRELILRNLQESLGVDKLTKQLETPGKVPHVYWGTATTGKPHVGYLVPMRKIADFLQA 76
Query: 527 GCEVTILFADLHAYLDNMKAPWELLSLRTQYYEAAIKAMLQ 649
G +VTILFADLHAYLDNMK+ WELL R YYE IKA+LQ
Sbjct: 77 GLKVTILFADLHAYLDNMKSSWELLKCRVIYYENVIKALLQ 117
Score = 42.3 bits (95), Expect = 3e-04
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +2
Query: 401 DEKLTEILKTRDLKIYWGTATTGRPHVAYFVPMSKIADFLKAG---CEVTILFADLHAYL 571
D L ++ + L + + GR H+ + P+ KI + AG TIL + L A+L
Sbjct: 392 DRVLADVSPQKPLHLMFIAPGKGRFHLGFIAPLLKIKEISDAGGVPVIATILVSPLEAFL 451
Query: 572 DNMKAPWELLSLRTQYYEAAIKAMLQ 649
DN K W + R Y+ ++++
Sbjct: 452 DNEKVAWAAIQSRAVYFREMFISLIK 477
>Z93383-6|CAB07623.1| 283|Caenorhabditis elegans Hypothetical
protein F54B8.6 protein.
Length = 283
Score = 30.3 bits (65), Expect = 1.2
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = -3
Query: 481 YMGTSCCCSTPIDFKISCLQYFCKFFIT*NF-L*VSSYKKFFLLPSSHCRQNYLVFKINR 305
Y+ S CS I FK S ++C+FFI L VS K +FLL S Y V N
Sbjct: 25 YLLYSIFCSKKIIFKPSLSIFYCRFFIDVFLTLSVSINKTYFLLIS--ISNEYAV--KNL 80
Query: 304 KIFLIQSVLVFNLL 263
LI LVF+ +
Sbjct: 81 AFILIYPFLVFDTM 94
>AF036705-8|AAB95169.1| 685|Caenorhabditis elegans Hypothetical
protein F37C4.3 protein.
Length = 685
Score = 28.7 bits (61), Expect = 3.8
Identities = 28/86 (32%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Frame = +2
Query: 329 VLSTMATWEE--KKLLITRNLQEVLGDEKLTEILKTRDLKIYWGTATTGRPHVAYF-VPM 499
VLS + EE KKLLI QE EK +EILK Y G V F +P
Sbjct: 224 VLSNLDDEEEDCKKLLIDEESQEFCPKEKFSEILKFSQPGAYVGLVILLVITVFPFALPP 283
Query: 500 SKIADFLKAGCEVTILFADLHAYLDN 577
+ F+ G +L ++ + L N
Sbjct: 284 GFVRPFVTMGTGFLMLLSEDNLILSN 309
>AL032659-1|CAA21750.1| 298|Caenorhabditis elegans Hypothetical
protein Y71H9A.2 protein.
Length = 298
Score = 27.9 bits (59), Expect = 6.6
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 362 KLLITRNLQEVLGDEKLTEILKTRDLKIYWGTATTGRPHVAYFVPMSKI 508
KLL L+ +LG + LTE+L RD+ AT + + V + ++
Sbjct: 145 KLLAQTTLRNILGTKTLTEMLSDRDVISLQMQATLDETTIPWGVKVERV 193
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 371 ITRNLQEVLGDEKLTEILKTRDLKIYWGTATTGRPHVAYFVPMSKIAD 514
+ R +E + KL E++ LK+Y G RP+V+ +++ AD
Sbjct: 199 VMRKRREKKLETKLKEMMFGGSLKVYGGEIVPTRPYVSILAEINENAD 246
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 371 ITRNLQEVLGDEKLTEILKTRDLKIYWGTATTGRPHVAYFVPMSKIAD 514
+ R +E + KL E++ LK+Y G RP+V+ +++ AD
Sbjct: 197 VMRKRREKKLETKLKEMMFGGSLKVYGGEIVPTRPYVSILAEINENAD 244
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 371 ITRNLQEVLGDEKLTEILKTRDLKIYWGTATTGRPHVAYFVPMSKIAD 514
+ R +E + KL E++ LK+Y G RP+V+ +++ AD
Sbjct: 197 VMRKRREKKLETKLKEMMFGGSLKVYGGEIVPTRPYVSILAEINENAD 244
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 371 ITRNLQEVLGDEKLTEILKTRDLKIYWGTATTGRPHVAYFVPMSKIAD 514
+ R +E + KL E++ LK+Y G RP+V+ +++ AD
Sbjct: 197 VMRKRREKKLETKLKEMMFGGSLKVYGGEIVPTRPYVSILAEINENAD 244
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 27.5 bits (58), Expect = 8.7
Identities = 14/48 (29%), Positives = 25/48 (52%)
Frame = +2
Query: 371 ITRNLQEVLGDEKLTEILKTRDLKIYWGTATTGRPHVAYFVPMSKIAD 514
+ R +E + KL E++ LK+Y G RP+V+ +++ AD
Sbjct: 197 VMRKRREKKLETKLKEMMFGGSLKVYGGEIVPTRPYVSILAEINENAD 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,455,044
Number of Sequences: 27780
Number of extensions: 270833
Number of successful extensions: 548
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 546
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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