Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0007_A01
         (274 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     21   3.7  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    19   8.4  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    19   8.4  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +3

Query: 144 KVAQTVNLNLKKYFIVNCMYTLFVL-NEIINKI 239
           K+A+T++ + K   I     T+F+L NEII  I
Sbjct: 184 KIAETLDEDTKNKLIEESK-TVFILNNEIIRSI 215


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 164 VDSLGYLHVQTLYRFRSRPNS 102
           ++S GY      Y++   PNS
Sbjct: 156 IESFGYTMRDIRYKWNEGPNS 176


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 19.4 bits (38), Expect = 8.4
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -3

Query: 164 VDSLGYLHVQTLYRFRSRPNS 102
           ++S GY      Y++   PNS
Sbjct: 95  IESFGYTMRDIRYKWNEGPNS 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,942
Number of Sequences: 438
Number of extensions: 1564
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5263398
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)