Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_P23
(291 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49909-1|CAA90105.1| 298|Caenorhabditis elegans Hypothetical pr... 81 1e-16
Z78542-5|CAB01748.1| 915|Caenorhabditis elegans Hypothetical pr... 27 3.0
Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical pr... 26 3.9
Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical p... 26 3.9
U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical p... 26 5.2
U80453-5|AAK31443.1| 378|Caenorhabditis elegans Hypothetical pr... 26 5.2
AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic ace... 26 5.2
AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical ... 26 5.2
AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical ... 26 5.2
AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinate... 26 5.2
Z92972-4|CAB07489.2| 337|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z81577-3|CAB04649.1| 528|Caenorhabditis elegans Hypothetical pr... 25 6.8
U97196-13|AAK68666.1| 430|Caenorhabditis elegans Altered averme... 25 6.8
U41113-1|AAC25482.1| 430|Caenorhabditis elegans inhibitory amin... 25 6.8
U23529-6|AAL32208.1| 384|Caenorhabditis elegans Hypothetical pr... 25 6.8
AF077541-1|AAL77189.1| 803|Caenorhabditis elegans Alpha-catulin... 25 9.1
>Z49909-1|CAA90105.1| 298|Caenorhabditis elegans Hypothetical
protein C14A4.1 protein.
Length = 298
Score = 81.4 bits (192), Expect = 1e-16
Identities = 36/49 (73%), Positives = 43/49 (87%)
Frame = +3
Query: 3 EALGSIATEDCIEILKRYLNDSRRVVRESCEVALDMSEYENSPEFQYAN 149
EALG+IA E+C EILK+Y+ND RVVRESCEVALDM+EYENS + QYA+
Sbjct: 249 EALGAIANEECTEILKQYVNDEERVVRESCEVALDMAEYENSDDLQYAH 297
Score = 33.5 bits (73), Expect = 0.026
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +3
Query: 3 EALGSIATEDCIEILKRYLNDSRRVVRESCEVALDMSEY 119
EALG+IA ++L++Y D V E+C++AL E+
Sbjct: 98 EALGAIADPSVKDVLRKYAQDPCPEVSETCQIALGRVEW 136
>Z78542-5|CAB01748.1| 915|Caenorhabditis elegans Hypothetical
protein F20D1.6 protein.
Length = 915
Score = 26.6 bits (56), Expect = 3.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +3
Query: 39 EILKRYLNDSRRVVRESCEVALDMSEYENSPEFQYANTLLTVES 170
EIL Y D+R+ +R AL + ++ E A LT+ S
Sbjct: 322 EILGVYREDTRKAIRSDLNCALILGKHYTQKELPNAFQKLTINS 365
>Z81509-9|CAB04158.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 45 LKRYLNDSRRVVRESCEVALDMSEYENSPEFQY 143
L Y D+ RES L MS+Y+N +QY
Sbjct: 367 LHAYHQDNPTPARESIRRRLSMSQYDNMLIYQY 399
>Z81463-12|CAB03855.3| 503|Caenorhabditis elegans Hypothetical
protein F21A3.7 protein.
Length = 503
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +3
Query: 45 LKRYLNDSRRVVRESCEVALDMSEYENSPEFQY 143
L Y D+ RES L MS+Y+N +QY
Sbjct: 367 LHAYHQDNPTPARESIRRRLSMSQYDNMLIYQY 399
>U97005-12|AAB52289.1| 1121|Caenorhabditis elegans Hypothetical
protein F19F10.11a protein.
Length = 1121
Score = 25.8 bits (54), Expect = 5.2
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 27 EDCIEILKRYLNDSRRVVRESCEVALDMSEYENSPE 134
E+C+ KR+L D RV E + +D +EYE E
Sbjct: 1071 ENCLSKRKRHLLDVERVFGE--DALVDDNEYEEEEE 1104
>U80453-5|AAK31443.1| 378|Caenorhabditis elegans Hypothetical
protein C23H3.3 protein.
Length = 378
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 33 CIEILKRYLNDSRRVVRESCEVALDMSEYENSPEF 137
C++ L+ +++DSR+ R + VAL ++E F
Sbjct: 159 CLDRLEIFIDDSRKTARVNHFVALPCDQHEVQENF 193
>AF288374-1|AAK83056.1| 502|Caenorhabditis elegans nicotinic
acetylcholine receptoralpha subunit protein.
Length = 502
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = -1
Query: 117 IQTYPEPP--HNSPGRHAVSHSSTFS 46
+ T P+PP H+ P R S +STFS
Sbjct: 373 LMTRPQPPGHHSKPNRKFDSRASTFS 398
>AF003140-4|AAD47119.1| 2712|Caenorhabditis elegans Hypothetical
protein C44E4.1a protein.
Length = 2712
Score = 25.8 bits (54), Expect = 5.2
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -1
Query: 198 YFRLIRELINFRQLIKYSHIETQG 127
+F+L + NFRQ+++ +E +G
Sbjct: 335 HFKLSARITNFRQIVRMIRVEVEG 358
>AF003140-3|AAM15563.1| 2710|Caenorhabditis elegans Hypothetical
protein C44E4.1c protein.
Length = 2710
Score = 25.8 bits (54), Expect = 5.2
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -1
Query: 198 YFRLIRELINFRQLIKYSHIETQG 127
+F+L + NFRQ+++ +E +G
Sbjct: 335 HFKLSARITNFRQIVRMIRVEVEG 358
>AC006708-21|AAF60421.3| 502|Caenorhabditis elegans Uncoordinated
protein 63 protein.
Length = 502
Score = 25.8 bits (54), Expect = 5.2
Identities = 12/26 (46%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Frame = -1
Query: 117 IQTYPEPP--HNSPGRHAVSHSSTFS 46
+ T P+PP H+ P R S +STFS
Sbjct: 373 LMTRPQPPGHHSKPNRKFDSRASTFS 398
>Z92972-4|CAB07489.2| 337|Caenorhabditis elegans Hypothetical
protein T19C9.4 protein.
Length = 337
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/26 (38%), Positives = 18/26 (69%)
Frame = -3
Query: 94 SQLSRTTRRESFKYLFRISIQSSVAI 17
S LS+ T+R+ +L +SIQ+S+ +
Sbjct: 240 STLSQATKRDQRTFLISVSIQTSIPL 265
>Z92775-2|CAB07162.2| 382|Caenorhabditis elegans Hypothetical
protein C06H5.2 protein.
Length = 382
Score = 25.4 bits (53), Expect = 6.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 233 LEYLSFSYWYM 265
+EYL F YWYM
Sbjct: 48 MEYLHFEYWYM 58
>Z92775-1|CAB07161.2| 379|Caenorhabditis elegans Hypothetical
protein C06H5.1 protein.
Length = 379
Score = 25.4 bits (53), Expect = 6.8
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 233 LEYLSFSYWYM 265
+EYL F YWYM
Sbjct: 48 MEYLHFEYWYM 58
>Z81577-3|CAB04649.1| 528|Caenorhabditis elegans Hypothetical
protein R11.3 protein.
Length = 528
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -2
Query: 233 IKDT**YTKCFSISG*YVNLLTFD 162
I DT TKCF I G ++NLL +
Sbjct: 487 ISDTQGETKCFKIVGFFLNLLVLN 510
>U97196-13|AAK68666.1| 430|Caenorhabditis elegans Altered
avermectin sensitivityprotein 14, isoform b protein.
Length = 430
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 73 VSSGRVVRWLWICLNMKTALSFNMRILY*LSKVNKFTY*PEILKHLVYYYVSFI 234
+S+ R V+ L I + LS N+ I + +++ T+ L++YYV+++
Sbjct: 372 LSAYRSVKRLPIIKRISEILSTNIDISRRVDLMSRLTFPLTFFSFLIFYYVAYV 425
>U41113-1|AAC25482.1| 430|Caenorhabditis elegans inhibitory amino
acid receptorsubunit gbr-2B protein.
Length = 430
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/54 (25%), Positives = 29/54 (53%)
Frame = +1
Query: 73 VSSGRVVRWLWICLNMKTALSFNMRILY*LSKVNKFTY*PEILKHLVYYYVSFI 234
+S+ R V+ L I + LS N+ I + +++ T+ L++YYV+++
Sbjct: 372 LSAYRSVKRLPIIKRISEILSTNIDISRRVDLMSRLTFPLTFFSFLIFYYVAYV 425
>U23529-6|AAL32208.1| 384|Caenorhabditis elegans Hypothetical
protein C15B12.1 protein.
Length = 384
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/40 (27%), Positives = 20/40 (50%)
Frame = +3
Query: 24 TEDCIEILKRYLNDSRRVVRESCEVALDMSEYENSPEFQY 143
++ CI++ +++ VV S +D Y NSP+ Y
Sbjct: 286 SQRCIDLPAKFIQKYMPVVDGSAPTRIDKCIYTNSPDDHY 325
>AF077541-1|AAL77189.1| 803|Caenorhabditis elegans Alpha-catulin
(catenin/vinculinrelated) protein 1, isoform a protein.
Length = 803
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -1
Query: 165 RQLIKYSHIETQGCFHIQTYPEPPHNS 85
+QLIK++H+ Q + T P PP S
Sbjct: 734 QQLIKHTHLVVQLRADVITVPRPPTGS 760
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,461,152
Number of Sequences: 27780
Number of extensions: 118269
Number of successful extensions: 352
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 344
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 352
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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