Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_P22
         (365 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer am...    28   2.4  
U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer am...    28   2.4  
U23529-12|AAL13323.1|  561|Caenorhabditis elegans Cation diffusi...    27   4.1  
U23529-11|AAK39165.1|  519|Caenorhabditis elegans Cation diffusi...    27   4.1  
Z80216-4|CAB02281.1|  395|Caenorhabditis elegans Hypothetical pr...    27   5.4  
Z70285-3|CAE17840.1|  214|Caenorhabditis elegans Hypothetical pr...    27   5.4  
DQ907010-1|ABI83734.1|  405|Caenorhabditis elegans EAK-6B isofor...    27   5.4  
DQ907009-1|ABI83733.1|  388|Caenorhabditis elegans EAK-6A isofor...    27   5.4  
AF039050-10|AAC47933.2|  362|Caenorhabditis elegans Seven tm rec...    26   9.5  

>U28940-3|AAD31556.1| 1212|Caenorhabditis elegans Transbilayer
            amphipath transporters(subfamily iv p-type atpase)
            protein 4, isoform a protein.
          Length = 1212

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 246  LCNTYSYFLRKNTSIVFTLRLYALFRVMRG 335
            L NT+ YFL KN + VF +  Y  +    G
Sbjct: 991  LANTFLYFLYKNANAVFIIFYYQFYNGASG 1020


>U28940-1|AAD31557.1| 1454|Caenorhabditis elegans Transbilayer
            amphipath transporters(subfamily iv p-type atpase)
            protein 4, isoform b protein.
          Length = 1454

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 246  LCNTYSYFLRKNTSIVFTLRLYALFRVMRG 335
            L NT+ YFL KN + VF +  Y  +    G
Sbjct: 991  LANTFLYFLYKNANAVFIIFYYQFYNGASG 1020


>U23529-12|AAL13323.1|  561|Caenorhabditis elegans Cation diffusion
           facilitator familyprotein 1, isoform b protein.
          Length = 561

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = -2

Query: 151 ISVNAIFFGTHPSRKAGYYCIRKETCSLVIEGVYKIIKCAAI 26
           ++   I   T PS + GY  +R ET      G++    C  +
Sbjct: 155 VAFTCIKIATRPSTRLGYGWVRAETLGGFFNGIFMCTVCVLV 196


>U23529-11|AAK39165.1|  519|Caenorhabditis elegans Cation diffusion
           facilitator familyprotein 1, isoform a protein.
          Length = 519

 Score = 27.1 bits (57), Expect = 4.1
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = -2

Query: 151 ISVNAIFFGTHPSRKAGYYCIRKETCSLVIEGVYKIIKCAAI 26
           ++   I   T PS + GY  +R ET      G++    C  +
Sbjct: 113 VAFTCIKIATRPSTRLGYGWVRAETLGGFFNGIFMCTVCVLV 154


>Z80216-4|CAB02281.1|  395|Caenorhabditis elegans Hypothetical
           protein F10G8.4 protein.
          Length = 395

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 281 YIYCLYITFIRTLSRNARHLSAKFESH 361
           +IY + I +IRT     RHL    E+H
Sbjct: 308 FIYDIIIKYIRTRHNQLRHLEKYLEAH 334


>Z70285-3|CAE17840.1|  214|Caenorhabditis elegans Hypothetical
           protein F56C4.3 protein.
          Length = 214

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 14/47 (29%), Positives = 20/47 (42%)
 Frame = -2

Query: 181 MFNHKPRYTRISVNAIFFGTHPSRKAGYYCIRKETCSLVIEGVYKII 41
           +FN  P   R+     F G+ P RK   +  +      VIEG  K +
Sbjct: 41  IFNQCPEARRLFPKLKFVGSKPDRKNNEFAFQAMRFMQVIEGAVKAL 87


>DQ907010-1|ABI83734.1|  405|Caenorhabditis elegans EAK-6B isoform
           protein.
          Length = 405

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 281 YIYCLYITFIRTLSRNARHLSAKFESH 361
           +IY + I +IRT     RHL    E+H
Sbjct: 301 FIYDIIIKYIRTRHNQLRHLEKYLEAH 327


>DQ907009-1|ABI83733.1|  388|Caenorhabditis elegans EAK-6A isoform
           protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 5.4
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +2

Query: 281 YIYCLYITFIRTLSRNARHLSAKFESH 361
           +IY + I +IRT     RHL    E+H
Sbjct: 301 FIYDIIIKYIRTRHNQLRHLEKYLEAH 327


>AF039050-10|AAC47933.2|  362|Caenorhabditis elegans Seven tm
           receptor protein 82 protein.
          Length = 362

 Score = 25.8 bits (54), Expect = 9.5
 Identities = 12/45 (26%), Positives = 28/45 (62%)
 Frame = +1

Query: 187 KFNTKKYKSFYSITLILRTLYAIRTLIFYGKIHLLSLHYVYTHSF 321
           KF+  +Y S+  + +++ TLYAI + I   ++ +L  + V+ +++
Sbjct: 32  KFSRPEYGSYKLLMMVMATLYAIYSAI---EVIILPSYLVFEYNY 73


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,616,501
Number of Sequences: 27780
Number of extensions: 139922
Number of successful extensions: 432
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 428
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 432
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)