Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_P20
(548 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13019-8|AAC24446.2| 238|Caenorhabditis elegans Hypothetical pr... 59 2e-09
Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical pr... 32 0.24
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 30 0.95
Z77667-2|CAB01234.1| 211|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF045643-4|AAC02597.3| 529|Caenorhabditis elegans Ligand-gated ... 29 2.9
Z71262-9|CAA95817.2| 440|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical pr... 28 3.9
D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic nucleoti... 28 3.9
AY037797-1|AAK94762.1| 412|Caenorhabditis elegans GLY-18 protein. 28 3.9
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 28 5.1
AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 28 5.1
AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical ... 28 5.1
AF016672-4|AAD47126.1| 968|Caenorhabditis elegans Hypothetical ... 28 5.1
Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical pr... 27 6.7
Z83218-5|CAB05691.1| 352|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z77661-6|CAB01185.1| 192|Caenorhabditis elegans Hypothetical pr... 27 8.9
Z50029-1|CAA90340.2| 460|Caenorhabditis elegans Hypothetical pr... 27 8.9
>U13019-8|AAC24446.2| 238|Caenorhabditis elegans Hypothetical
protein T12A2.7 protein.
Length = 238
Score = 58.8 bits (136), Expect = 2e-09
Identities = 35/138 (25%), Positives = 69/138 (50%)
Frame = +3
Query: 24 WSESVDNSHAQLSHQAIRVLNLELQLQYGSEAWRSYLSTLQALVTSSQNLHSHLRKQIAA 203
W++ + N+ AQ H +R +NLEL +Y +E++ ++ L+T ++ ++ +
Sbjct: 113 WAKVLRNAKAQNEHLLMRQINLELMDEYAAESYLQRNKVMEDLLTHAEKELRKTKEAVME 172
Query: 204 VNWERKRSQTGSGXXXXXXXXXWAQLVSDNYRVERAIMQLEIQLQKAKGEMPAESDEAAD 383
V+ RK +Q +G W +V++NYR+E Q+ +SD
Sbjct: 173 VHANRKMAQLKAGEKVKQLEQSWVSMVTNNYRMEMENRQI-------------DSDNRKQ 219
Query: 384 MEAVKLLPDKLNSESEKE 437
++A+KL P KL+ + ++E
Sbjct: 220 IKALKLDPTKLDDKEDQE 237
>Z70756-1|CAA94789.1| 1295|Caenorhabditis elegans Hypothetical
protein T06E4.1 protein.
Length = 1295
Score = 32.3 bits (70), Expect = 0.24
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 2/140 (1%)
Frame = +3
Query: 54 QLSHQAIRVLNLELQLQYGSEAWRSYLSTLQALVTSSQNLHSHLRK-QIAAVNWERKRSQ 230
+L IR+ LEL + + S L L+ + Q L L++ QI + R+ S+
Sbjct: 586 ELEEAEIRIKELELAQEEAVKTGSSQLKKLEIVQEDCQKLRDQLKEEQIQQLVSLRETSE 645
Query: 231 TGSGXXXXXXXXXWAQLVSDNYRVERAIMQLEIQLQKAKGEMPAESDEAADMEAVKLLPD 410
+ Q+ S E +++L + + E+ +SD AAD + +L D
Sbjct: 646 VMHQESARHQEEKY-QIQSKLMSTEAEVIELRSSIDSLQAEVRVQSDSAADQK--HILED 702
Query: 411 KLNS-ESEKEVQKKIEDMFA 467
L +E +K+ A
Sbjct: 703 YLRKIRQAEETNEKLRSDLA 722
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 30.3 bits (65), Expect = 0.95
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +3
Query: 300 VERAIMQLEIQLQKAKGEMPAESDEAADMEAVKLLPDKLNSESEKEVQKKIE 455
+ERA+++ + AKGE+ +E E EA K K+ + EK+ +KK E
Sbjct: 149 MERALLEFGTDEEPAKGEVKSEKKEEKKEEA-KKEEKKVEKKEEKKDKKKDE 199
>Z77667-2|CAB01234.1| 211|Caenorhabditis elegans Hypothetical
protein M04B2.3 protein.
Length = 211
Score = 29.9 bits (64), Expect = 1.3
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +3
Query: 288 DNYRVERAIMQLEIQLQKAKGEMPAESDEAADMEAVKLLPDKLNSESEKEVQKKIEDM 461
D + +Q+ LQ + G+ P + D+E VK +L ++KE+ +IED+
Sbjct: 132 DEIIFQEPTVQMYKALQASDGKRPDKQAFLNDIEQVKTRTRELGEVAQKEIAAEIEDL 189
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.7 bits (61), Expect = 2.9
Identities = 16/36 (44%), Positives = 23/36 (63%)
Frame = -2
Query: 325 SSCMMARSTL*LSETSCAQRLRNARSRAPLPVCERL 218
SS M RS+ L T A + AR+++P+P+CERL
Sbjct: 386 SSVMRDRSSSWLDLTRPAP-IERARTQSPIPLCERL 420
>AF045643-4|AAC02597.3| 529|Caenorhabditis elegans Ligand-gated ion
channel protein 30 protein.
Length = 529
Score = 28.7 bits (61), Expect = 2.9
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Frame = -3
Query: 195 SASLNDYADSVNS*PEPEACSNMISMPLNHTEVAIRGSVHGSLD----EITARVNCLQIL 28
S + N A S++S P+ N+I +N TEV +H L+ E T +++ + L
Sbjct: 416 SRNNNVQAISLHSTPDRNVAKNLIPKEINFTEVNQDAPLHDVLEGPSAEKTQKIDLIVSL 475
Query: 27 TMLLVHLND 1
++HL +
Sbjct: 476 LREIIHLKE 484
>Z71262-9|CAA95817.2| 440|Caenorhabditis elegans Hypothetical
protein F22D6.11 protein.
Length = 440
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 84 NLELQLQYGSEAWRSYLSTLQALVTSSQNLHSHLR 188
N+E L Y ++ WR Y+S Q + S N H++++
Sbjct: 327 NVETNLTYPTDGWRYYISRDQ--IWSKPNCHNYMK 359
>Z19157-1|CAB63418.2| 733|Caenorhabditis elegans Hypothetical
protein ZC84.2 protein.
Length = 733
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 318 QLEIQLQKAKGEMPAESDEAADMEAVKLLPDKLNSESEKEV 440
QLEI++ K + +D + +K+LPDKL +E +V
Sbjct: 443 QLEIRVIKWFDYLWTNKQSLSDQQVLKVLPDKLQAEIAMQV 483
>D86922-1|BAA13180.1| 733|Caenorhabditis elegans cyclic
nucleotide-gated channel protein.
Length = 733
Score = 28.3 bits (60), Expect = 3.9
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +3
Query: 318 QLEIQLQKAKGEMPAESDEAADMEAVKLLPDKLNSESEKEV 440
QLEI++ K + +D + +K+LPDKL +E +V
Sbjct: 443 QLEIRVIKWFDYLWTNKQSLSDQQVLKVLPDKLQAEIAMQV 483
>AY037797-1|AAK94762.1| 412|Caenorhabditis elegans GLY-18 protein.
Length = 412
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 84 NLELQLQYGSEAWRSYLSTLQALVTSSQNLHSHLR 188
N+E L Y ++ WR Y+S Q + S N H++++
Sbjct: 299 NVETNLTYPTDGWRYYISRDQ--IWSKPNCHNYMK 331
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Frame = +3
Query: 288 DNYRVERAIMQLEIQLQKAKGEMPAESDE---AADMEAVKLLPDKLNSESEKEVQ 443
D YR + ++ +I +A+ + PAE D+ +++E VKL N++ + VQ
Sbjct: 1700 DKYREKCEVLTAKIAELEAQLQNPAEEDQQQKTSNVELVKLRQQLANAQQDMRVQ 1754
>AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical
protein F52G3.5 protein.
Length = 386
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -3
Query: 87 GSVHGSLDEITARVNCLQILTMLLVHLND 1
G V G +T ++NC +LT L HL D
Sbjct: 289 GCVEGQCCILTPQINCTDVLTGCLTHLCD 317
>AF016672-5|AAB66120.1| 951|Caenorhabditis elegans Hypothetical
protein F56D12.6b protein.
Length = 951
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 195 SASLNDYADSVNS*PEPEACSNMISMPLNHTEVAIRGSVHGSL 67
S +L DSV PE + + S+ N E++ G VHGSL
Sbjct: 838 STNLTGSVDSVMCEPEAKWVAGNPSLGWNLLEISRNGDVHGSL 880
>AF016672-4|AAD47126.1| 968|Caenorhabditis elegans Hypothetical
protein F56D12.6a protein.
Length = 968
Score = 27.9 bits (59), Expect = 5.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 195 SASLNDYADSVNS*PEPEACSNMISMPLNHTEVAIRGSVHGSL 67
S +L DSV PE + + S+ N E++ G VHGSL
Sbjct: 855 STNLTGSVDSVMCEPEAKWVAGNPSLGWNLLEISRNGDVHGSL 897
>Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical
protein C50B6.7 protein.
Length = 713
Score = 27.5 bits (58), Expect = 6.7
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 231 FANVYVPNSPPLSASLNDYADSVNS*PEPEACSNMISMPLNHTEVAIR 88
FA Y SPP S + NDYA + + + C++ H AIR
Sbjct: 365 FAFSYSDQSPPNSGASNDYATTSPTFNGDQTCNSNSGWVCEHRWPAIR 412
>Z83218-5|CAB05691.1| 352|Caenorhabditis elegans Hypothetical
protein C31A11.9 protein.
Length = 352
Score = 27.1 bits (57), Expect = 8.9
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +3
Query: 78 VLNLELQLQYGSEAWRSYLSTLQALVTSSQNLHSHL 185
+++L + YG + WR + + + QN+HS L
Sbjct: 215 IISLVFSIYYGVKCWRRMHAIFSSSSSQFQNIHSQL 250
>Z77661-6|CAB01185.1| 192|Caenorhabditis elegans Hypothetical
protein F40G12.7 protein.
Length = 192
Score = 27.1 bits (57), Expect = 8.9
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 270 WAQLVSDNYRVERAIMQLEIQLQKAKGEMPAESDEA--ADMEAVKLLPDKLNSESEKEVQ 443
W QL + +E +LE + ++ ++DE AD+E +L L + +E++
Sbjct: 83 WTQLKREKGVLETENRRLETAKSELDRQLLGKNDELRMADVEGRGVLKSSLEKQLCEELK 142
Query: 444 KKIEDM 461
K EDM
Sbjct: 143 KNNEDM 148
>Z50029-1|CAA90340.2| 460|Caenorhabditis elegans Hypothetical
protein ZC504.1 protein.
Length = 460
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +2
Query: 47 TRAVISSSDPCTEPRIATSVWFRGMEIIFEHASGSGYEF 163
T V+S+ P P ATSV++ +I E GY F
Sbjct: 332 TYGVVSNYKPALCPPRATSVFYANTQINVECTPAEGYSF 370
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,134,700
Number of Sequences: 27780
Number of extensions: 209305
Number of successful extensions: 763
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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