Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_P17
(522 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D86978-1|BAA13214.1| 2013|Homo sapiens KIAA0225 protein. 31 2.4
BC146784-1|AAI46785.1| 2012|Homo sapiens nucleoporin 205kDa prot... 31 2.4
BC063612-1|AAH63612.1| 617|Homo sapiens NUP205 protein protein. 31 2.4
BC044255-1|AAH44255.1| 832|Homo sapiens NUP205 protein protein. 31 2.4
AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down synd... 31 3.2
AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhe... 31 3.2
AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhe... 31 3.2
AF023450-1|AAC17967.1| 1571|Homo sapiens Down syndrome cell adhe... 31 3.2
AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhe... 31 3.2
AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhe... 31 3.2
DQ854807-1|ABI23973.1| 365|Homo sapiens visual system homeobox ... 29 9.9
BC142693-1|AAI42694.1| 272|Homo sapiens Unknown (protein for MG... 29 9.9
BC141816-1|AAI41817.1| 272|Homo sapiens Unknown (protein for MG... 29 9.9
BC126228-1|AAI26229.1| 365|Homo sapiens visual system homeobox ... 29 9.9
AL359846-6|CAH73579.1| 2261|Homo sapiens ATP-binding cassette, s... 29 9.9
AL353685-3|CAH72444.1| 2261|Homo sapiens ATP-binding cassette, s... 29 9.9
AL353685-2|CAH72443.1| 363|Homo sapiens ATP-binding cassette, s... 29 9.9
AL080312-3|CAI18918.1| 365|Homo sapiens visual system homeobox ... 29 9.9
AK024328-1|BAB14887.1| 363|Homo sapiens protein ( Homo sapiens ... 29 9.9
AJ012376-1|CAA10005.1| 2201|Homo sapiens ATP-binding cassette tr... 29 9.9
AF287262-1|AAK43526.1| 2261|Homo sapiens ATP-binding cassette 1 ... 29 9.9
AF285167-1|AAF98175.1| 2261|Homo sapiens ATP-binding cassette tr... 29 9.9
AF275948-1|AAF86276.1| 2261|Homo sapiens ABCA1 protein. 29 9.9
AF251033-1|AAF99656.1| 365|Homo sapiens homeodomain protein RIN... 29 9.9
AF176797-1|AAF37425.2| 365|Homo sapiens transcription factor VS... 29 9.9
AF165281-1|AAD49849.1| 2201|Homo sapiens ATP cassette binding tr... 29 9.9
AB055982-1|BAB63210.1| 2261|Homo sapiens ABCA1 protein. 29 9.9
>D86978-1|BAA13214.1| 2013|Homo sapiens KIAA0225 protein.
Length = 2013
Score = 31.1 bits (67), Expect = 2.4
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = -1
Query: 429 SLWNRLTLPSGGQLVTETRDVSVCKSRSVSIDIVVCQSSCSGSQL 295
++W RLT P + ++++ +S ++ VVC+ +C G ++
Sbjct: 1448 TMWERLTAPEDVFSKLQRENIAIIESYGAALMEVVCRDACDGHEI 1492
>BC146784-1|AAI46785.1| 2012|Homo sapiens nucleoporin 205kDa protein.
Length = 2012
Score = 31.1 bits (67), Expect = 2.4
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = -1
Query: 429 SLWNRLTLPSGGQLVTETRDVSVCKSRSVSIDIVVCQSSCSGSQL 295
++W RLT P + ++++ +S ++ VVC+ +C G ++
Sbjct: 1447 TMWERLTAPEDVFSKLQRENIAIIESYGAALMEVVCRDACDGHEI 1491
>BC063612-1|AAH63612.1| 617|Homo sapiens NUP205 protein protein.
Length = 617
Score = 31.1 bits (67), Expect = 2.4
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = -1
Query: 429 SLWNRLTLPSGGQLVTETRDVSVCKSRSVSIDIVVCQSSCSGSQL 295
++W RLT P + ++++ +S ++ VVC+ +C G ++
Sbjct: 52 TMWERLTAPEDVFSKLQRENIAIIESYGAALMEVVCRDACDGHEI 96
>BC044255-1|AAH44255.1| 832|Homo sapiens NUP205 protein protein.
Length = 832
Score = 31.1 bits (67), Expect = 2.4
Identities = 11/45 (24%), Positives = 25/45 (55%)
Frame = -1
Query: 429 SLWNRLTLPSGGQLVTETRDVSVCKSRSVSIDIVVCQSSCSGSQL 295
++W RLT P + ++++ +S ++ VVC+ +C G ++
Sbjct: 267 TMWERLTAPEDVFSKLQRENIAIIESYGAALMEVVCRDACDGHEI 311
>AL163281-2|CAB90444.1| 1029|Homo sapiens human CHD2-52 down
syndrome cell adhesion molecule protein.
Length = 1029
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 103 GYYIEQYDDQPEQWGNSQVAPGKRVLSLSTL 195
GY ++ +D EQWG+ ++P +R L L
Sbjct: 428 GYILQYSEDNSEQWGSFPISPSERSYRLENL 458
>AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhesion
molecule splice variant protein.
Length = 1746
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 103 GYYIEQYDDQPEQWGNSQVAPGKRVLSLSTL 195
GY ++ +D EQWG+ ++P +R L L
Sbjct: 1163 GYILQYSEDNSEQWGSFPISPSERSYRLENL 1193
>AF217525-1|AAF27525.1| 2012|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 2012
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 103 GYYIEQYDDQPEQWGNSQVAPGKRVLSLSTL 195
GY ++ +D EQWG+ ++P +R L L
Sbjct: 1411 GYILQYSEDNSEQWGSFPISPSERSYRLENL 1441
>AF023450-1|AAC17967.1| 1571|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 1571
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 103 GYYIEQYDDQPEQWGNSQVAPGKRVLSLSTL 195
GY ++ +D EQWG+ ++P +R L L
Sbjct: 1411 GYILQYSEDNSEQWGSFPISPSERSYRLENL 1441
>AF023449-1|AAC17966.1| 1896|Homo sapiens Down syndrome cell adhesion
molecule protein.
Length = 1896
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 103 GYYIEQYDDQPEQWGNSQVAPGKRVLSLSTL 195
GY ++ +D EQWG+ ++P +R L L
Sbjct: 1397 GYILQYSEDNSEQWGSFPISPSERSYRLENL 1427
>AB209136-1|BAD92373.1| 2023|Homo sapiens Down syndrome cell adhesion
molecule isoform CHD2-42 precursor variant protein.
Length = 2023
Score = 30.7 bits (66), Expect = 3.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +1
Query: 103 GYYIEQYDDQPEQWGNSQVAPGKRVLSLSTL 195
GY ++ +D EQWG+ ++P +R L L
Sbjct: 1422 GYILQYSEDNSEQWGSFPISPSERSYRLENL 1452
>DQ854807-1|ABI23973.1| 365|Homo sapiens visual system homeobox 1
transcript variant 1 protein.
Length = 365
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 14 ANIRRCSPSYSSCLFSWSASTAGTCSLKSLATTSNSMMISRSSGATPRLRPASGCSHYQ 190
A +R C P S L S G+C+ L SM + R G+ +L G H++
Sbjct: 240 AMVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSMGMIRKPGSEDKLAGLWGSDHFK 298
>BC142693-1|AAI42694.1| 272|Homo sapiens Unknown (protein for
MGC:165011) protein.
Length = 272
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 336 DIVVCQSSCSGSQLHLVSEINGAKSTELV 250
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>BC141816-1|AAI41817.1| 272|Homo sapiens Unknown (protein for
MGC:164864) protein.
Length = 272
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 336 DIVVCQSSCSGSQLHLVSEINGAKSTELV 250
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>BC126228-1|AAI26229.1| 365|Homo sapiens visual system homeobox 1
protein.
Length = 365
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 14 ANIRRCSPSYSSCLFSWSASTAGTCSLKSLATTSNSMMISRSSGATPRLRPASGCSHYQ 190
A +R C P S L S G+C+ L SM + R G+ +L G H++
Sbjct: 240 AMVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSMGMIRKPGSEDKLAGLWGSDHFK 298
>AL359846-6|CAH73579.1| 2261|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberisiae) protein.
Length = 2261
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 336 DIVVCQSSCSGSQLHLVSEINGAKSTELV 250
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AL353685-3|CAH72444.1| 2261|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberog, Drosophila) protein.
Length = 2261
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 336 DIVVCQSSCSGSQLHLVSEINGAKSTELV 250
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AL353685-2|CAH72443.1| 363|Homo sapiens ATP-binding cassette,
sub-family A (ABC1), memberog, Drosophila) protein.
Length = 363
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 336 DIVVCQSSCSGSQLHLVSEINGAKSTELV 250
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AL080312-3|CAI18918.1| 365|Homo sapiens visual system homeobox 1
homolog, CHX10-like (zebrafish) protein.
Length = 365
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 14 ANIRRCSPSYSSCLFSWSASTAGTCSLKSLATTSNSMMISRSSGATPRLRPASGCSHYQ 190
A +R C P S L S G+C+ L SM + R G+ +L G H++
Sbjct: 240 AMVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSMGMIRKPGSEDKLAGLWGSDHFK 298
>AK024328-1|BAB14887.1| 363|Homo sapiens protein ( Homo sapiens
cDNA FLJ14266 fis, clone PLACE1002437, highly similar to
ATP-BINDING CASSETTE TRANSPORTER 1. ).
Length = 363
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 336 DIVVCQSSCSGSQLHLVSEINGAKSTELV 250
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AJ012376-1|CAA10005.1| 2201|Homo sapiens ATP-binding cassette
transporter-1 (ABC-1) protein.
Length = 2201
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 336 DIVVCQSSCSGSQLHLVSEINGAKSTELV 250
D+++ + G QLHL S NG+KS E++
Sbjct: 116 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 144
>AF287262-1|AAK43526.1| 2261|Homo sapiens ATP-binding cassette 1
sub-family A member 1 protein.
Length = 2261
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 336 DIVVCQSSCSGSQLHLVSEINGAKSTELV 250
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AF285167-1|AAF98175.1| 2261|Homo sapiens ATP-binding cassette
transporter 1 protein.
Length = 2261
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 336 DIVVCQSSCSGSQLHLVSEINGAKSTELV 250
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AF275948-1|AAF86276.1| 2261|Homo sapiens ABCA1 protein.
Length = 2261
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 336 DIVVCQSSCSGSQLHLVSEINGAKSTELV 250
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
>AF251033-1|AAF99656.1| 365|Homo sapiens homeodomain protein RINX,
L1 isoform protein.
Length = 365
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 14 ANIRRCSPSYSSCLFSWSASTAGTCSLKSLATTSNSMMISRSSGATPRLRPASGCSHYQ 190
A +R C P S L S G+C+ L SM + R G+ +L G H++
Sbjct: 240 AMVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSMGMIRKPGSEDKLAGLWGSDHFK 298
>AF176797-1|AAF37425.2| 365|Homo sapiens transcription factor VSX1
protein.
Length = 365
Score = 29.1 bits (62), Expect = 9.9
Identities = 17/59 (28%), Positives = 25/59 (42%)
Frame = +2
Query: 14 ANIRRCSPSYSSCLFSWSASTAGTCSLKSLATTSNSMMISRSSGATPRLRPASGCSHYQ 190
A +R C P S L S G+C+ L SM + R G+ +L G H++
Sbjct: 240 AMVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSMGMIRKPGSEDKLAGLWGSDHFK 298
>AF165281-1|AAD49849.1| 2201|Homo sapiens ATP cassette binding
transporter 1 protein.
Length = 2201
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 336 DIVVCQSSCSGSQLHLVSEINGAKSTELV 250
D+++ + G QLHL S NG+KS E++
Sbjct: 116 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 144
>AB055982-1|BAB63210.1| 2261|Homo sapiens ABCA1 protein.
Length = 2261
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = -1
Query: 336 DIVVCQSSCSGSQLHLVSEINGAKSTELV 250
D+++ + G QLHL S NG+KS E++
Sbjct: 176 DVILHKVFLQGYQLHLTSLCNGSKSEEMI 204
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,131,708
Number of Sequences: 237096
Number of extensions: 1761332
Number of successful extensions: 8187
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 8008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8187
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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