Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_P17
         (522 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ178242-1|ABA18181.1|  578|Caenorhabditis elegans Frizzled homo...    28   3.5  
AF022969-3|AAB69892.1|  244|Caenorhabditis elegans Hypothetical ...    28   3.5  
AF016413-2|ABA54421.1|  578|Caenorhabditis elegans Caenorhabditi...    28   3.5  
Z78410-3|CAB01641.1|  555|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U32305-8|AAK18853.4|  492|Caenorhabditis elegans Regulator of g ...    27   6.2  
Z82069-5|CAB04906.2|  739|Caenorhabditis elegans Hypothetical pr...    27   8.1  
Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>DQ178242-1|ABA18181.1|  578|Caenorhabditis elegans Frizzled homolog
           protein.
          Length = 578

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 50  CLFSWSASTAGTCSLKSLATTSNSMMISRSSGATPRLRPA 169
           C+  W+ S    CS K+L++  N++    SS + P+ +PA
Sbjct: 508 CILGWT-SGFWVCSTKTLSSWKNAICCLGSSRSLPKYQPA 546


>AF022969-3|AAB69892.1|  244|Caenorhabditis elegans Hypothetical
           protein C29G2.3 protein.
          Length = 244

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 18/54 (33%), Positives = 27/54 (50%)
 Frame = +2

Query: 20  IRRCSPSYSSCLFSWSASTAGTCSLKSLATTSNSMMISRSSGATPRLRPASGCS 181
           + +CS    S +   S +T  T +  ++ATT+ S    R   A PR R A+G S
Sbjct: 141 VYKCSIGGGSTVAPVSGATTQTLAPTTVATTTKSEEDIRFKRALPRERAAAGVS 194


>AF016413-2|ABA54421.1|  578|Caenorhabditis elegans Caenorhabditis
           frizzled homologprotein 2, isoform a protein.
          Length = 578

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/40 (32%), Positives = 23/40 (57%)
 Frame = +2

Query: 50  CLFSWSASTAGTCSLKSLATTSNSMMISRSSGATPRLRPA 169
           C+  W+ S    CS K+L++  N++    SS + P+ +PA
Sbjct: 508 CILGWT-SGFWVCSTKTLSSWKNAICCLGSSRSLPKYQPA 546


>Z78410-3|CAB01641.1|  555|Caenorhabditis elegans Hypothetical
           protein C51E3.6 protein.
          Length = 555

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 13/46 (28%), Positives = 25/46 (54%)
 Frame = -1

Query: 417 RLTLPSGGQLVTETRDVSVCKSRSVSIDIVVCQSSCSGSQLHLVSE 280
           R T P G  L+   + V VC S  +++ +++  S C GS + ++ +
Sbjct: 24  RDTPPIGIALLYGLQQVMVCVSALLTVPLIMADSMCPGSSIAVLRQ 69


>U32305-8|AAK18853.4|  492|Caenorhabditis elegans Regulator of g
           protein signalingprotein 5 protein.
          Length = 492

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
 Frame = +1

Query: 304 AATAGLAYDNVNGHGATLTNTH--IPGFGDKLTAAWQSQPV 420
           A ++  AY N N H  +L N H  IP   + LT A QS  +
Sbjct: 21  ATSSDGAYQNGNAHRDSLVNDHICIPAQRNSLTVAQQSADI 61


>Z82069-5|CAB04906.2|  739|Caenorhabditis elegans Hypothetical
           protein W04A8.6 protein.
          Length = 739

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = -3

Query: 187 IVRAPACRAQPGSCPTAPADHHTVRCSSQALQ 92
           ++  P     P SCP AP D  + R SS+ ++
Sbjct: 256 VITKPKTTKGPMSCPGAPLDDRSFRSSSRKIK 287


>Z49132-7|CAA88986.1|  403|Caenorhabditis elegans Hypothetical
           protein ZK666.7 protein.
          Length = 403

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 280 LTNQMKLGAATAGLAY--DNVNGHGATLTNTHIPGF 381
           L  +MK+  A A +AY  DNVNG    L+    PG+
Sbjct: 180 LATRMKVDVAIATVAYGQDNVNGFLRQLSQIATPGY 215


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,371,002
Number of Sequences: 27780
Number of extensions: 251259
Number of successful extensions: 809
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)