Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_P13
         (562 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   4.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   4.9  
DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein ...    21   6.4  
AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein ...    21   6.4  
AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific pro...    21   6.4  

>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 311 KTIKMVCSFKNI-FTYILWYDMIRYDIFLLNYKYEFFPN*TLII 439
           +T+++ C         I+W    R  +  +N K + FPN TLII
Sbjct: 506 ETLRVTCPVAGYPIESIVWERDTR--VLPINRKQKVFPNGTLII 547


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 10/40 (25%), Positives = 21/40 (52%)
 Frame = +1

Query: 127 NHVKIVIVFRYLLKLK*SNKEIIYLRTNKTLKHLHRQKDL 246
           +H ++  +   ++K+K S   IIY  +N  +K     ++L
Sbjct: 264 DHYQVKAMVEIVMKMKWSYVSIIYEESNYGIKAFEELEEL 303


>DQ855484-1|ABH88171.1|  130|Apis mellifera chemosensory protein 3
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = -3

Query: 188 SLFDYFNFNKYLNTITIFT*F*YCLKKNHKASCMYDALWSILPDR*LELNLRNC 27
           S FD  N ++ L++  +   +  CL    + +   + L  +LPD  L  + + C
Sbjct: 27  SKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDA-LATDCKKC 79


>AJ973401-1|CAJ01448.1|  130|Apis mellifera hypothetical protein
           protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = -3

Query: 188 SLFDYFNFNKYLNTITIFT*F*YCLKKNHKASCMYDALWSILPDR*LELNLRNC 27
           S FD  N ++ L++  +   +  CL    + +   + L  +LPD  L  + + C
Sbjct: 27  SKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDA-LATDCKKC 79


>AF481963-1|AAN59784.1|  130|Apis mellifera antennal-specific
           protein 3c precursor protein.
          Length = 130

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 13/54 (24%), Positives = 25/54 (46%)
 Frame = -3

Query: 188 SLFDYFNFNKYLNTITIFT*F*YCLKKNHKASCMYDALWSILPDR*LELNLRNC 27
           S FD  N ++ L++  +   +  CL    + +   + L  +LPD  L  + + C
Sbjct: 27  SKFDNINVDEILHSDRLLNNYFKCLMDEGRCTAEGNELKRVLPDA-LATDCKKC 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,198
Number of Sequences: 438
Number of extensions: 3499
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16195212
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)