Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_P11
(562 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit Rpt2|Schi... 335 3e-93
SPCC576.10c |rpt3||19S proteasome regulatory subunit Rpt3|Schizo... 259 2e-70
SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit Rpt6|S... 258 3e-70
SPBC16C6.07c |rpt1||19S proteasome regulatory subunit Rpt1|Schiz... 241 4e-65
SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit ... 232 3e-62
SPCC1682.16 |rpt4||19S proteasome regulatory subunit Rpt4|Schizo... 227 6e-61
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz... 169 2e-43
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 167 1e-42
SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces p... 161 8e-41
SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces pomb... 151 5e-38
SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr 1|||... 145 4e-36
SPCC965.04c |||mitochondrial inner membrane i-AAA protease compl... 145 4e-36
SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyc... 138 5e-34
SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomy... 135 5e-33
SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces po... 131 8e-32
SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces po... 124 9e-30
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 115 5e-27
SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1 |Schiz... 114 7e-27
SPAC1834.11c |sec18||secretory pathway protein Sec18 |Schizosacc... 110 2e-25
SPAC328.04 |||AAA family ATPase, unknown biological role|Schizos... 105 3e-24
SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces po... 72 7e-14
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 39 6e-04
SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces pombe... 34 0.016
SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces pombe... 33 0.038
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 31 0.088
SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces ... 31 0.088
SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr 3... 31 0.15
SPCC1442.07c |||ubiquitin/metalloprotease fusion protein|Schizos... 28 0.82
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 28 0.82
SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces pomb... 28 1.1
SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein Bms1|Schizosacc... 28 1.1
SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomy... 27 1.9
SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|... 27 1.9
SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces... 26 3.3
SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces... 26 3.3
SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomy... 26 4.4
SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|c... 26 4.4
SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr 2|... 25 5.8
SPAC23D3.02 |rfc2||DNA replication factor C complex subunit Rfc2... 25 5.8
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 25 5.8
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 25 5.8
SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|c... 25 5.8
SPAC110.02 |pds5||cohesin-associated protein Pds5|Schizosaccharo... 25 5.8
SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr... 25 7.6
SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomy... 25 7.6
>SPBC4.07c |rpt2|mts2|19S proteasome regulatory subunit
Rpt2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 448
Score = 335 bits (823), Expect = 3e-93
Identities = 161/188 (85%), Positives = 176/188 (93%), Gaps = 1/188 (0%)
Frame = +1
Query: 1 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKG 180
+L DDTDPM++VMKL+KAP E+YADIGGL++QIQEIKE+VELPLTHPE YEEMGIKPPKG
Sbjct: 168 LLLDDTDPMINVMKLDKAPTESYADIGGLESQIQEIKEAVELPLTHPELYEEMGIKPPKG 227
Query: 181 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 360
VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGP+LVR+LF AEEH+PSI
Sbjct: 228 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPRLVRQLFNAAEEHSPSI 287
Query: 361 VFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFD-SRGDVXVIMATNRIETLDPA 537
VFIDEIDA+GTKRYD+ SG EREIQRTMLELLNQLDGFD S+ D+ VIMATNRI LDPA
Sbjct: 288 VFIDEIDAIGTKRYDAQSGAEREIQRTMLELLNQLDGFDTSQRDIKVIMATNRISDLDPA 347
Query: 538 LIRPGRID 561
LIRPGRID
Sbjct: 348 LIRPGRID 355
>SPCC576.10c |rpt3||19S proteasome regulatory subunit
Rpt3|Schizosaccharomyces pombe|chr 3|||Manual
Length = 389
Score = 259 bits (635), Expect = 2e-70
Identities = 111/187 (59%), Positives = 155/187 (82%)
Frame = +1
Query: 1 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKG 180
+L + D +S+++ ++ P +YAD+GGLD Q QE++E+VELPLT + Y ++GI PP+G
Sbjct: 111 ILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRG 170
Query: 181 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 360
V+LYG PGTGKT+L KAVAN T+A F+RVVGSE +QKYLG+GP++VR++FR+A E+AP+I
Sbjct: 171 VLLYGPPGTGKTMLVKAVANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAI 230
Query: 361 VFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPAL 540
+FIDEIDA+ TKR+D+ +G +RE+QR ++ELL Q+DGFD +V VIMATNR +TLDPAL
Sbjct: 231 IFIDEIDAIATKRFDAQTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPAL 290
Query: 541 IRPGRID 561
+RPGR+D
Sbjct: 291 LRPGRLD 297
>SPBC23G7.12c |rpt6|let1|19S proteasome regulatory subunit
Rpt6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 403
Score = 258 bits (633), Expect = 3e-70
Identities = 117/188 (62%), Positives = 154/188 (81%), Gaps = 1/188 (0%)
Frame = +1
Query: 1 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKG 180
+L + DP+VS+M +EK P TY +GGL+ QI+EIKE +ELP+ HPE +E +GI PKG
Sbjct: 122 ILPNKVDPLVSLMMVEKIPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKG 181
Query: 181 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 360
++LYG PGTGKTLLA+AVA+ T F+RV GSEL+QKY+G+G ++VRELF +A EHAPSI
Sbjct: 182 ILLYGPPGTGKTLLARAVAHHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSI 241
Query: 361 VFIDEIDAVGTKRYDSNSG-GEREIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPA 537
+F+DEID++G+ R DS+ G G+ E+QRTMLELLNQLDGF++ ++ VIMATNRI+ LDPA
Sbjct: 242 IFMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPA 301
Query: 538 LIRPGRID 561
L+RPGRID
Sbjct: 302 LLRPGRID 309
>SPBC16C6.07c |rpt1||19S proteasome regulatory subunit
Rpt1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 438
Score = 241 bits (591), Expect = 4e-65
Identities = 107/181 (59%), Positives = 142/181 (78%)
Frame = +1
Query: 19 DPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGA 198
DP V++M++E+ P TY D+GG QI+ ++E VELPL PE + ++GI PPKG++LYG
Sbjct: 162 DPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGIMLYGP 221
Query: 199 PGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 378
PGTGKTL A+AVAN+T ATF+RV+GSEL+QKY+G+G ++VRELF +A I+F DEI
Sbjct: 222 PGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACIIFFDEI 281
Query: 379 DAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIRPGRI 558
DA+G R+D +GG+ E+QRTMLEL+ QLDGFD RG++ V+ ATNR TLD AL+RPGRI
Sbjct: 282 DAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALMRPGRI 341
Query: 559 D 561
D
Sbjct: 342 D 342
>SPAC3A11.12c |rpt5|pam2, tbp1|19S proteasome regulatory subunit
Rpt5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 438
Score = 232 bits (567), Expect = 3e-62
Identities = 102/186 (54%), Positives = 145/186 (77%)
Frame = +1
Query: 4 LGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGV 183
L + D V M++++ P E Y+DIGGL QI+E+ E++ LP+ + + ++G+KPPKG
Sbjct: 163 LPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRKLGVKPPKGC 222
Query: 184 ILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIV 363
+++G PGTGKTLLA+A A Q++ATFL++ +L+Q ++GDG KLVR+ F +A+E +P+I+
Sbjct: 223 LMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFALAKEKSPAII 282
Query: 364 FIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALI 543
FIDE+DA+GTKR+DS G+RE+QRTMLELLNQLDGF S V VI ATNR++TLDPAL+
Sbjct: 283 FIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNRVDTLDPALL 342
Query: 544 RPGRID 561
R GR+D
Sbjct: 343 RSGRLD 348
>SPCC1682.16 |rpt4||19S proteasome regulatory subunit
Rpt4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 388
Score = 227 bits (556), Expect = 6e-61
Identities = 99/187 (52%), Positives = 141/187 (75%)
Frame = +1
Query: 1 VLGDDTDPMVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKG 180
+L + DP+V M +E ++A +GGL+ QI+E++E +ELPL +PE + +GIKPPKG
Sbjct: 109 ILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKG 168
Query: 181 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSI 360
V+LYG PGTGKTLLA+AVA FL+VV S ++ KY+G+ +++RE+F A+EH P +
Sbjct: 169 VLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYAKEHEPCV 228
Query: 361 VFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPAL 540
+F+DEIDA+G +R+ + +REIQRT++ELLNQ+DGFD G +IMATNR +TLDPAL
Sbjct: 229 IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNRPDTLDPAL 288
Query: 541 IRPGRID 561
+RPGR+D
Sbjct: 289 LRPGRLD 295
>SPBC56F2.07c |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 809
Score = 169 bits (411), Expect = 2e-43
Identities = 78/171 (45%), Positives = 117/171 (68%)
Frame = +1
Query: 49 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAK 228
++P ++DIGG + Q++KESVE PLTH E + +G++PPKGV+LYG PG KT+ AK
Sbjct: 541 ESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAK 600
Query: 229 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 408
A+A +T F+ V G EL K++G+ + VR++F+ A + +PS++F DEIDA+ R +
Sbjct: 601 AIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRGED 660
Query: 409 NSGGEREIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIRPGRID 561
NS R + LLN+LDG ++ +V V+ ATNR + +DPAL+RPGR+D
Sbjct: 661 NSS-----DRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLD 706
Score = 153 bits (372), Expect = 1e-38
Identities = 76/166 (45%), Positives = 107/166 (64%)
Frame = +1
Query: 64 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 243
T++ IGGL QI +I++ VELP +PE ++ I PP+GV+LYG PGTGKT++ +AVA +
Sbjct: 277 TFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVAAE 336
Query: 244 TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGE 423
+A + G ++ KYLG+ +R++F A H PSI+FIDEIDA+ KR + S E
Sbjct: 337 ANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRTEDVSEAE 396
Query: 424 REIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIRPGRID 561
R + LL LDG + G V VI ATNR ++D AL RPGR++
Sbjct: 397 ---SRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLE 439
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 167 bits (406), Expect = 1e-42
Identities = 80/165 (48%), Positives = 117/165 (70%)
Frame = +1
Query: 67 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 246
Y DIGG Q+ +I+E VELPL HP+ ++ +GIKPP+G+++YG PGTGKTL+A+AVAN+T
Sbjct: 223 YDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANET 282
Query: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 426
A F + G E++ K G+ +R+ F AE+++P+I+FIDEID++ KR +N GE
Sbjct: 283 GAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREKTN--GEV 340
Query: 427 EIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIRPGRID 561
E +R + +LL +DG +R +V V+ ATNR ++DPAL R GR D
Sbjct: 341 E-RRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFD 384
Score = 156 bits (379), Expect = 2e-39
Identities = 73/171 (42%), Positives = 115/171 (67%)
Frame = +1
Query: 49 KAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAK 228
+ P + DIGGL+ +E++E+V++P+ + E + G+ P KGV+ +G PGTGKTLLAK
Sbjct: 490 EVPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAK 549
Query: 229 AVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 408
A+AN+ SA F+ V G EL+ + G+ VR++F A AP +VF+DE+D++ R +
Sbjct: 550 AIANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKAR-GA 608
Query: 409 NSGGEREIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIRPGRID 561
++G R + +LL ++DG +S+ +V VI ATNR + +DPAL+RPGR+D
Sbjct: 609 SAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLD 659
>SPBC543.09 |||mitochondrial m-AAA protease|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 773
Score = 161 bits (390), Expect = 8e-41
Identities = 80/166 (48%), Positives = 109/166 (65%), Gaps = 1/166 (0%)
Frame = +1
Query: 67 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 246
+AD+ G+D +EI E V+ L +P++YE +G K P+G IL G PGTGKTLLAKA A +
Sbjct: 295 FADVAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEA 353
Query: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKR-YDSNSGGE 423
+ FL V GSE ++ ++G GP VR+LF A ++AP I+FIDEIDA+G R G
Sbjct: 354 NVPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSN 413
Query: 424 REIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIRPGRID 561
E + T+ +LL ++DGF S + V TNR + LDPAL+RPGR D
Sbjct: 414 DERESTLNQLLVEMDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFD 459
>SPBC16E9.10c |||AAA family ATPase Rix7 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 779
Score = 151 bits (367), Expect = 5e-38
Identities = 73/169 (43%), Positives = 109/169 (64%)
Frame = +1
Query: 55 PQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAV 234
P ++ +IG L + E++ ++ P+ PE Y+ +GI P GV+L+G PG GKTLLAKAV
Sbjct: 487 PGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAKAV 546
Query: 235 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNS 414
AN++ A F+ + G EL+ KY+G+ + VR++F A +P ++F DE+DA+ +R DS S
Sbjct: 547 ANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRRDDSLS 606
Query: 415 GGEREIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIRPGRID 561
+ T LL +LDG R V VI ATNR + +DPA++RPGR+D
Sbjct: 607 EASSRVVNT---LLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLD 652
Score = 140 bits (340), Expect = 1e-34
Identities = 74/165 (44%), Positives = 101/165 (61%), Gaps = 1/165 (0%)
Frame = +1
Query: 70 ADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTS 249
+DIGGLD I E+ E V +P+ HPE Y+ GI PP+GV+L+G PG GKT+LA A+AN+
Sbjct: 174 SDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANELG 233
Query: 250 ATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGERE 429
F+ + ++ G+ K VRE+F A+ AP ++FIDEIDAV KR + ER
Sbjct: 234 VPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKRESAQREMERR 293
Query: 430 IQRTMLELLNQLDGFDSRG-DVXVIMATNRIETLDPALIRPGRID 561
I L +++L + G V VI ATNR ++LD AL R GR D
Sbjct: 294 IVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFD 338
>SPAC17A5.01 |pex6||peroxin-6 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 948
Score = 145 bits (351), Expect = 4e-36
Identities = 77/191 (40%), Positives = 118/191 (61%), Gaps = 8/191 (4%)
Frame = +1
Query: 13 DTDPMVSVMKLEKA------PQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPP 174
D D ++ ++ EK+ P+ + DIGGL+ ++++++LPL PE + + G+KP
Sbjct: 630 DVDVSINRIRKEKSNTIFTVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQ-GLKPR 688
Query: 175 KGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP 354
GV+LYG PGTGKTLLAKAVA + S F+ + G EL+ Y+G+ VR +F A +P
Sbjct: 689 SGVLLYGPPGTGKTLLAKAVATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSP 748
Query: 355 SIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGF--DSRGDVXVIMATNRIETL 528
++F DE+D++ R +S+ G + R + +LL +LD D+ V VI ATNR + L
Sbjct: 749 CVIFFDELDSIAPHRGNSSDSG-NVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLL 807
Query: 529 DPALIRPGRID 561
DP+L+RPGR D
Sbjct: 808 DPSLLRPGRFD 818
Score = 28.3 bits (60), Expect = 0.82
Identities = 31/118 (26%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Frame = +1
Query: 184 ILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAP-SI 360
+L+G P TGKT + VA+ SA + E D + ++F +P +I
Sbjct: 426 LLHGNPFTGKTKAVEEVASLFSAPVFTISSYEFADA-TADHLEAKLDMFVQNVVKSPCAI 484
Query: 361 VFIDEIDAVGTKRYDSN-SGGEREIQRTMLELLNQLDGFDS-RGDVXVIMATNRIETL 528
+F+ ++D + + N G + IQ LL+++D S +G VI + IE +
Sbjct: 485 IFVKDLDVLSISSDEGNIVPGSKSIQ----ILLSKIDLVKSPQGRYIVIGTCHSIEKI 538
>SPCC965.04c |||mitochondrial inner membrane i-AAA protease complex
subunit Yme1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 709
Score = 145 bits (351), Expect = 4e-36
Identities = 79/176 (44%), Positives = 112/176 (63%), Gaps = 4/176 (2%)
Frame = +1
Query: 46 EKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLA 225
E+A ++D+ G+D +E++E V+ L P ++ +G K P+GV+L G PGTGKT+LA
Sbjct: 259 ERAINVRFSDVQGVDEAKEELEEIVDF-LRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLA 317
Query: 226 KAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYD 405
+AVA + + F + GS+ + Y+G G K VRELF A + APSI+FIDE+DA+G KR
Sbjct: 318 RAVAGEANVPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELDAIGQKR-- 375
Query: 406 SNSGGEREIQRTMLELLNQLDGFDSRGD----VXVIMATNRIETLDPALIRPGRID 561
N+ +++T+ +LL LDGF D V I ATN E+LDPAL RPGR D
Sbjct: 376 -NARDAAHMRQTLNQLLVDLDGFSKNEDLAHPVVFIGATNFPESLDPALTRPGRFD 430
>SPAC31G5.19 |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1190
Score = 138 bits (334), Expect = 5e-34
Identities = 70/171 (40%), Positives = 105/171 (61%), Gaps = 5/171 (2%)
Frame = +1
Query: 64 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQ 243
++ +GGLD I ++KE V LPL +PE ++ ++PP+GV+ +G PGTGKTL+A+A+A
Sbjct: 264 SFESVGGLDNYINQLKEMVMLPLLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAA 323
Query: 244 TSA-----TFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 408
S+ +F G++ + K++G+ + +R LF A+ PSI+F DEID + R
Sbjct: 324 CSSENKKVSFYMRKGADCLSKWVGEAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSK 383
Query: 409 NSGGEREIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIRPGRID 561
I T+L L +DG +SRG V +I ATNR + +DPAL RPGR D
Sbjct: 384 QEQIHASIVSTLLAL---MDGMESRGQVIIIGATNRPDAVDPALRRPGRFD 431
Score = 35.5 bits (78), Expect = 0.005
Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
Frame = +1
Query: 142 EYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLV 318
E +E + I P+ +I G G G+T L A+ Q ++ S L+Q +
Sbjct: 593 ETFETLRIYKPRFLIC-GRKGLGQTALGPAILQQYEGVHVQSFDMSTLLQDSTQSIETSI 651
Query: 319 RELFRVAEEHAPSIVFIDEID 381
LF H PSI++I +ID
Sbjct: 652 IHLFLEVRRHTPSIIYIPDID 672
>SPBP22H7.05c |||ATPase with bromodomain protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1201
Score = 135 bits (326), Expect = 5e-33
Identities = 76/171 (44%), Positives = 102/171 (59%), Gaps = 6/171 (3%)
Frame = +1
Query: 67 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA--- 237
+ IGGL+ I ++KE V LPL +PE + + I PP+GV+ +G PGTGKTL+A+ +A
Sbjct: 371 FNSIGGLEDIILQLKEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANC 430
Query: 238 ---NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDS 408
NQ + FLR GS+ + K++G+ + +R LF A PSI+F DEID + R
Sbjct: 431 STKNQKISFFLR-KGSDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSK 489
Query: 409 NSGGEREIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIRPGRID 561
I T+L L +DG D+RG V VI ATNR LDPAL RPGR D
Sbjct: 490 QEQTHSSIVSTLLAL---MDGLDTRGQVVVIGATNRPNDLDPALRRPGRFD 537
Score = 30.7 bits (66), Expect = 0.15
Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 202 GTGKTLLAKAVANQTSATFLRVVG-SELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEI 378
G G T L+K + + ++ + SEL+ L+ ++F A ++APSI+FI+ +
Sbjct: 716 GYGCTYLSKVLFSMLDGIHVQSLDISELLMDTTTSPRSLLTKIFSEARKNAPSIIFINNV 775
Query: 379 D 381
+
Sbjct: 776 E 776
>SPAC2G11.06 |vps4||AAA family ATPase Vps4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 131 bits (316), Expect = 8e-32
Identities = 73/174 (41%), Positives = 107/174 (61%)
Frame = +1
Query: 25 MVSVMKLEKAPQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPG 204
+ S + +EK P + DI GL+ + +KE+V LP+ P+ + G KP G++LYG PG
Sbjct: 115 LTSAILVEK-PNVRWDDIAGLENAKEALKETVLLPIKLPQLFSH-GRKPWSGILLYGPPG 172
Query: 205 TGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDA 384
TGK+ LAKAVA + +TF + S+L+ K++G+ +LVR+LF +A E PSI+FIDEID+
Sbjct: 173 TGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLFEMAREQKPSIIFIDEIDS 232
Query: 385 VGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIR 546
+ R + S R I+ L +N + G D G V V+ ATN TLD A+ R
Sbjct: 233 LCGSRSEGESESSRRIKTEFLVQMNGV-GKDESG-VLVLGATNIPWTLDSAIRR 284
>SPCC553.03 |pex1||AAA family ATPase Pex1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 937
Score = 124 bits (299), Expect = 9e-30
Identities = 57/165 (34%), Positives = 100/165 (60%)
Frame = +1
Query: 67 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 246
+ DI G+ + +++ +E P+ + Y++ ++ P G++L+G PG GKT LA A+++
Sbjct: 605 WIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCGKTYLASAISSTF 664
Query: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 426
F+ + G EL+ KY+G + VR+LF A+ P ++F DE D+V +R ++G
Sbjct: 665 PVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTG--- 721
Query: 427 EIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIRPGRID 561
R + ++L Q+DG +S V ++ AT R + +DPAL+RPGR+D
Sbjct: 722 VTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLD 766
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 115 bits (276), Expect = 5e-27
Identities = 57/126 (45%), Positives = 81/126 (64%)
Frame = +1
Query: 67 YADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 246
++DI GLD +KE+V P PE ++ + +P +G++L+G PGTGKT+LA+AVA +
Sbjct: 378 WSDIAGLDDAKNSLKEAVIYPFLRPELFQGLR-EPVQGMLLFGPPGTGKTMLARAVATEA 436
Query: 247 SATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGER 426
ATF + S L KYLGD KLVR LF VA+ S++F+DEID++ + R D SG E
Sbjct: 437 KATFFSISASSLTSKYLGDSEKLVRALFEVAKRQTCSVIFVDEIDSILSARND--SGNEH 494
Query: 427 EIQRTM 444
E R +
Sbjct: 495 ESSRRL 500
>SPCC24B10.10c |||mitochondrial outer membrane ATPase Msp1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 355
Score = 114 bits (275), Expect = 7e-27
Identities = 63/163 (38%), Positives = 97/163 (59%), Gaps = 2/163 (1%)
Frame = +1
Query: 64 TYADIGGLDTQIQEIKESVELPLTHPEYYEEMG--IKPPKGVILYGAPGTGKTLLAKAVA 237
++ DIGG+D + ++ + V PL +PE ++ G + PKG++LYG PG GKT+LAKA+A
Sbjct: 87 SFDDIGGMDEHVNQLLQDVLFPLKYPEVFDTHGGLLSCPKGLLLYGPPGCGKTMLAKALA 146
Query: 238 NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSG 417
Q+ ATF+ V L K+ G+ KLV LF +A + P+I+FIDEID +R ++
Sbjct: 147 KQSQATFINVSVGLLTDKWFGESNKLVDALFTLARKLEPTIIFIDEIDTFLRQRQRTDHE 206
Query: 418 GEREIQRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIR 546
+I+ + + + L SR V V+ ATNR +D A+ R
Sbjct: 207 AMAQIKAEFMSMWDGLLSGQSR--VLVLGATNRPADIDEAIRR 247
>SPAC1834.11c |sec18||secretory pathway protein Sec18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 792
Score = 110 bits (264), Expect = 2e-25
Identities = 65/173 (37%), Positives = 102/173 (58%), Gaps = 11/173 (6%)
Frame = +1
Query: 76 IGGLDTQIQEI-KESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSA 252
IGGLD++ I + + L P E++GI KG++LYG PGTGKTL+A+ + +A
Sbjct: 271 IGGLDSEFSAIFRRAFASRLFPPGMVEKLGINHVKGILLYGPPGTGKTLIARQIGKMLNA 330
Query: 253 TFLRVV-GSELIQKYLGDGPKLVRELFRVA--------EEHAPSIVFIDEIDAVGTKRYD 405
++V G E++ KY+G + VR+LF A EE I+ DE+DA+ KR
Sbjct: 331 REPKIVNGPEILNKYVGQSEENVRKLFADAEREYRDRGEESGLHIIIFDELDAICKKR-- 388
Query: 406 SNSGGEREI-QRTMLELLNQLDGFDSRGDVXVIMATNRIETLDPALIRPGRID 561
+SGG+ + + + +LL ++DG D ++ VI TNR + +D AL+RPGR++
Sbjct: 389 GSSGGDTGVGDQVVNQLLAKMDGVDQLNNILVIGMTNRKDMIDEALLRPGRLE 441
>SPAC328.04 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 741
Score = 105 bits (253), Expect = 3e-24
Identities = 51/122 (41%), Positives = 81/122 (66%)
Frame = +1
Query: 73 DIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSA 252
DI GL+ +KE+V P P+ ++ + +P +G++L+G PGTGKT+LA+AVA ++ +
Sbjct: 460 DISGLEFAKHSLKEAVVYPFLRPDLFQGLR-EPARGMLLFGPPGTGKTMLARAVATESRS 518
Query: 253 TFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREI 432
F + S L K+LG+ KLVR LF +A++ +PSI+F+DEID++ + R S+ G E E
Sbjct: 519 VFFSISASSLTSKFLGESEKLVRALFTLAKKLSPSIIFVDEIDSLLSAR--SSDGNEHET 576
Query: 433 QR 438
R
Sbjct: 577 SR 578
>SPAC644.07 |||Rieske ISP assembly protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 449
Score = 71.7 bits (168), Expect = 7e-14
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 1/160 (0%)
Frame = +1
Query: 85 LDTQIQE-IKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFL 261
L++ +++ I + V L + ++Y+ GI +G +LYG PG+GKT A+A +
Sbjct: 212 LESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDIC 271
Query: 262 RVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRT 441
+ L +K L D +L L V + ++V ++++D+ R S G T
Sbjct: 272 VL---NLAEKGLTDD-RLNHLLSNVPPK---AVVLLEDVDSAFQGRERSGEVGFHA-NVT 323
Query: 442 MLELLNQLDGFDSRGDVXVIMATNRIETLDPALIRPGRID 561
LLN LDG S + + M TN E LDPAL+RPGR+D
Sbjct: 324 FSGLLNALDGVTSSDERIIFMTTNHPEKLDPALVRPGRVD 363
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 38.7 bits (86), Expect = 6e-04
Identities = 40/141 (28%), Positives = 65/141 (46%), Gaps = 13/141 (9%)
Frame = +1
Query: 160 GIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRV-VG-----SEL---IQKYLGDGP- 309
G K + L G PG GKT + K++A+ + F R VG +E+ + Y+G P
Sbjct: 567 GTMQGKIMCLVGPPGVGKTSVGKSIASALNREFFRFSVGGLTDVAEIKGHRRTYIGAMPG 626
Query: 310 KLVRELFRVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREI---QRTMLELLNQLDGFDS 480
K+V+ L +V E+ ++ IDEID VG + E+ ++ L +D
Sbjct: 627 KIVQALKKVQTEN--PLILIDEIDKVGKSHQGDPASALLELLDSEQNSAFLDYYMDIPLD 684
Query: 481 RGDVXVIMATNRIETLDPALI 543
V + N I+T+ P L+
Sbjct: 685 VSSVLFVCTANTIDTIPPPLL 705
>SPAPB8E5.09 |||AAA family ATPase Rvb1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 456
Score = 33.9 bits (74), Expect = 0.016
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +1
Query: 175 KGVILYGAPGTGKTLLAKAVANQ--TSATFLRVVGSEL 282
KGV+ G GTGKT LA A+A + F +VGSE+
Sbjct: 65 KGVLFAGGAGTGKTALALAIAQELGPKVPFCPMVGSEV 102
>SPAC26H5.02c |||DNA replication ATPase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 504
Score = 32.7 bits (71), Expect = 0.038
Identities = 13/29 (44%), Positives = 21/29 (72%)
Frame = +1
Query: 181 VILYGAPGTGKTLLAKAVANQTSATFLRV 267
+IL+G+ GTGKT LA+ +A T + F+ +
Sbjct: 123 MILWGSAGTGKTTLARLIAVTTKSRFIEI 151
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 31.5 bits (68), Expect = 0.088
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +1
Query: 175 KGVILYGAPGTGKTLLAKAVANQTSATFLRV 267
K ++L G+PG GKT L A+A +T +R+
Sbjct: 1560 KPILLEGSPGVGKTSLITALARETGHQLVRI 1590
Score = 27.9 bits (59), Expect = 1.1
Identities = 13/42 (30%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 181 VILYGAPGTGKTLLAKAVANQTSATFLRVVGSEL--IQKYLG 300
+++ G +GKT + + VA +T F+R+ E +Q+Y+G
Sbjct: 897 ILIQGPTSSGKTSMIEYVAKKTGHKFVRINNHEHTDLQEYIG 938
>SPBC16D10.08c |||heat shock protein Hsp104 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 905
Score = 31.5 bits (68), Expect = 0.088
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 13/126 (10%)
Frame = +1
Query: 184 ILYGAPGTGKTLLAKAV----------ANQTSATFLRV-VGSELI-QKYLGDGPKLVREL 327
+L G PG GKT +A+ + AN ++ L + VGS + K+ G+ + ++ +
Sbjct: 206 VLIGEPGVGKTSIAEGLARRIIDDDVPANLSNCKLLSLDVGSLVAGSKFRGEFEERIKSV 265
Query: 328 FR-VAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVXVIM 504
+ V E P I+F+DE+ + + SGGE ++ N L +RG + I
Sbjct: 266 LKEVEESETPIILFVDEMHLL----MGAGSGGEGG-----MDAANLLKPMLARGKLHCIG 316
Query: 505 ATNRIE 522
AT E
Sbjct: 317 ATTLAE 322
Score = 28.7 bits (61), Expect = 0.62
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +1
Query: 166 KPPKGVILYGAPGTGKTLLAKAVAN---QTSATFLRVVGSELIQKY 294
+P + G GTGKTLL KA+A+ +R+ SE ++K+
Sbjct: 612 QPIASFLFCGPSGTGKTLLTKALASFMFDDENAMIRIDMSEYMEKH 657
>SPCC830.11c |||adenylate kinase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 175
Score = 30.7 bits (66), Expect = 0.15
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 181 VILYGAPGTGKTLLAKAVANQT 246
+I+ G PGTGKT LA+ VA T
Sbjct: 11 IIICGTPGTGKTTLAEQVAETT 32
>SPCC1442.07c |||ubiquitin/metalloprotease fusion
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 282
Score = 28.3 bits (60), Expect = 0.82
Identities = 14/60 (23%), Positives = 28/60 (46%)
Frame = +1
Query: 331 RVAEEHAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSRGDVXVIMAT 510
++ + H ++ + E+D R+DS + G Q +EL + D +D D + +T
Sbjct: 140 KIMDSHRWTVPLLSEMDPAEHTRHDSKTLGLNHNQGAHIELRLRTDRYDGFRDYKTVKST 199
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 28.3 bits (60), Expect = 0.82
Identities = 17/43 (39%), Positives = 20/43 (46%)
Frame = +1
Query: 175 KGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGD 303
K V+L G PG GKT A VA L + S+ K L D
Sbjct: 410 KAVLLSGPPGIGKTTAAHLVAKLEGYDVLELNASDTRSKRLLD 452
>SPAC1F3.09 |mug161||CwfJ family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 561
Score = 27.9 bits (59), Expect = 1.1
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -3
Query: 380 SISSINTIEGACSSATLNNSRTNLGPSPKYF*ISS 276
S S++N + + S +LNN R+ +GP +F +S+
Sbjct: 319 SHSALNNLHKSESGTSLNNRRSKVGPGSCFFCLSN 353
>SPBC31E1.06 |bms1|SPBC800.01|GTP binding protein
Bms1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1121
Score = 27.9 bits (59), Expect = 1.1
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +1
Query: 169 PPKGVILYGAPGTGKTLLAKAVANQTSA-TFLRVVG 273
PP V + G PGTGK+ L K++ + S T ++ G
Sbjct: 73 PPVIVAVMGPPGTGKSTLIKSLVRRYSKYTISQITG 108
>SPBC115.02c |||AFG1 family mitochondrial ATPase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 454
Score = 27.1 bits (57), Expect = 1.9
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +1
Query: 172 PKGVILYGAPGTGKTLL 222
PKG+ LYG G GKT L
Sbjct: 118 PKGIYLYGDVGCGKTAL 134
>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 554
Score = 27.1 bits (57), Expect = 1.9
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +1
Query: 277 ELIQKYLG---DGPKLVRELFRVAEEHA---PSIVFIDEIDAVGTKRYDSNSGGEREIQR 438
E I KY G +GP ++R+ A++ P V +D +GTK +D + E+E
Sbjct: 228 EYINKYRGRYSEGPDVLRKNRLQAQKDLGLIPENVIPAPVDGMGTKSWDELTTEEKEFSA 287
Query: 439 TMLEL 453
+E+
Sbjct: 288 RTMEV 292
>SPAC6F6.06c |rax2||cell polarity factor Rax2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1155
Score = 26.2 bits (55), Expect = 3.3
Identities = 17/82 (20%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Frame = -3
Query: 500 MTXTSPLESNPSSWLRSSNIVRWISLSPPELESYRFVPTASISSINTIEGACSSATLNNS 321
+ S E N + ++++ WI E S F P ++ + T++ T +N+
Sbjct: 375 LNSLSSYEGNFEASFSNASMPYWIQTIAGEQASVSFFPNITVPTNGTVQLLIPGCTYDNT 434
Query: 320 RTNLGP--SPKYF*ISSEPTTR 261
+ G + YF + +P T+
Sbjct: 435 CSQRGSVIANVYFAKNKQPATK 456
>SPAC3C7.03c |rhp55||RecA family ATPase Rhp55|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 350
Score = 26.2 bits (55), Expect = 3.3
Identities = 18/55 (32%), Positives = 25/55 (45%)
Frame = +1
Query: 193 GAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPS 357
GAPG GKT LA + + RV+ E Q P + L ++ + H PS
Sbjct: 51 GAPGMGKTSLALQITANALLSGSRVIWVETCQ------PIPMERLRQLLDNHVPS 99
>SPBC24C6.02 |||ATP-dependent RNA helicase Spb4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 606
Score = 25.8 bits (54), Expect = 4.4
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +1
Query: 46 EKAPQETYADIGGLDTQIQEI--KESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTL 219
EK P G L+ + I K L L + +MG + I+ P +T
Sbjct: 130 EKNPSVVIGTPGRLNEMLSHISSKHLEILILDEADTLIDMGFQRTLQSIISQLPKQRRTG 189
Query: 220 LAKAVANQTSATFLRVVG 273
L A N T ++FL++ G
Sbjct: 190 LFSATMNDTVSSFLKIAG 207
>SPBC83.08 |||AAA family ATPase Rvb2 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 465
Score = 25.8 bits (54), Expect = 4.4
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 2/92 (2%)
Frame = +1
Query: 175 KGVILYGAPGTGKTLLAKAVANQ--TSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEH 348
+ +++ G P TGKT +A +A + F+ + SE+ + L++ L +
Sbjct: 66 RAILMAGPPSTGKTAIAMGMAQSLGSDTPFVTLSASEVYSLEMSKTEALLQALRKSIGVR 125
Query: 349 APSIVFIDEIDAVGTKRYDSNSGGEREIQRTM 444
I E + V + S +GG ++ + T+
Sbjct: 126 IKEETEIIEGEVVEVQIDRSITGGNKQGKLTI 157
>SPBC14C8.07c |cdc18||MCM loader|Schizosaccharomyces pombe|chr
2|||Manual
Length = 577
Score = 25.4 bits (53), Expect = 5.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 193 GAPGTGKTLLAKAVANQTSATFLRV 267
GAPGTGKT+L V + + + +V
Sbjct: 199 GAPGTGKTVLLHNVLDHVVSDYPKV 223
>SPAC23D3.02 |rfc2||DNA replication factor C complex subunit
Rfc2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 340
Score = 25.4 bits (53), Expect = 5.8
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +1
Query: 181 VILYGAPGTGKTLLAKAVANQ 243
++ YG+PGTGKT A++ +
Sbjct: 55 MLFYGSPGTGKTSTILALSRE 75
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 25.4 bits (53), Expect = 5.8
Identities = 22/68 (32%), Positives = 33/68 (48%)
Frame = -3
Query: 536 AGSNVSIRFVAIMTXTSPLESNPSSWLRSSNIVRWISLSPPELESYRFVPTASISSINTI 357
+ S ++ A +T TS S+ SSW SS + + S S + TAS+S +T
Sbjct: 933 SSSAITSSVAASVTPTS--SSSASSWSSSSEVDPSTAASATG-SSTSSIATASVSGSSTS 989
Query: 356 EGACSSAT 333
A +SAT
Sbjct: 990 SVATASAT 997
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 25.4 bits (53), Expect = 5.8
Identities = 13/41 (31%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = +1
Query: 1 VLGDDTDPMVS-VMKLEKAPQETYADIGGLDTQIQEIKESV 120
VL D D + + +LEK ++ A + L T+I E+K +
Sbjct: 1278 VLRKDNDAKLGKIQELEKEVEKLNASLNPLQTEINELKAEI 1318
>SPCC338.16 |pof3||F-box protein Pof3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 577
Score = 25.4 bits (53), Expect = 5.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 454 LNQLDGFDSRGDVXVIMATNRIETLDPALIRP 549
L QLDGFD + D + +DP +RP
Sbjct: 84 LLQLDGFDKKADQLYTQGLRMVHKMDP--LRP 113
>SPAC110.02 |pds5||cohesin-associated protein
Pds5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1205
Score = 25.4 bits (53), Expect = 5.8
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +1
Query: 124 LPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATF-LRVVGSELIQK 291
LPL HP Y E+ I+ ++ G K + A + ++ F ++ +E+++K
Sbjct: 657 LPLIHPNIYGEVVIEVENIIVSSGIESDPKVIKALSQFSKRKKNFSIQTTTAEILRK 713
>SPAC6G10.09 |||glucosidase I Gls1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 808
Score = 25.0 bits (52), Expect = 7.6
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 370 DEIDAVGTKRYDSNSGGEREIQRTMLELLNQLD 468
D+I A G K YD GG++ I ++ + + D
Sbjct: 89 DDIGAFGWKHYDVRRGGQQVIDDFLMGIKLETD 121
>SPAC31A2.05c |mis4||cohesin loading factor Mis4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1583
Score = 25.0 bits (52), Expect = 7.6
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 86 LIPRFKKLKNQWSYH*HILNI 148
L+P FKKL+N+ S H+LNI
Sbjct: 335 LVPSFKKLQNEESIL-HLLNI 354
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.137 0.382
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,316,650
Number of Sequences: 5004
Number of extensions: 45856
Number of successful extensions: 191
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 152
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 167
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 236012634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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