Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_P05
(286 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|ch... 30 0.074
SPAC926.03 |rlc1||myosin II regulatory light chain |Schizosaccha... 28 0.30
SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+] |Schizosacc... 27 0.52
SPBC15D4.04 |gpt2|gpt, alg7|UDP-N-acetylglucosamine--dolichyl-ph... 27 0.69
SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual 26 0.92
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 25 2.8
SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating |S... 24 4.9
SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr 1||... 23 6.5
SPBC17G9.12c |||conserved fungal protein|Schizosaccharomyces pom... 23 6.5
SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces pom... 23 6.5
SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pm... 23 6.5
SPBC1709.03 |||conserved fungal protein|Schizosaccharomyces pomb... 23 8.5
SPAC22E12.16c |pik1||phosphatidylinositol kinase Pik1|Schizosacc... 23 8.5
SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation... 23 8.5
SPBC2G2.08 |ade9||C-1-tetrahydrofolatesynthase/methylenetetrahyd... 23 8.5
>SPAC3A12.14 |cam1||calmodulin Cam1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 150
Score = 29.9 bits (64), Expect = 0.074
Identities = 22/66 (33%), Positives = 33/66 (50%)
Frame = +1
Query: 31 VEQAFKKLDKTGDGLITIDDIRDVYSVATQPRYKSGEQSADHIMNKFLANFESGGTVDGK 210
V +AFK DK G+G IT++++ V + + S E+ AD I E+ DG
Sbjct: 87 VREAFKVFDKDGNGYITVEELTHV--LTSLGERLSQEEVADMIR-------EADTDGDGV 137
Query: 211 VTLEEF 228
+ EEF
Sbjct: 138 INYEEF 143
>SPAC926.03 |rlc1||myosin II regulatory light chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 184
Score = 27.9 bits (59), Expect = 0.30
Identities = 15/51 (29%), Positives = 29/51 (56%)
Frame = +1
Query: 7 MSESRRSIVEQAFKKLDKTGDGLITIDDIRDVYSVATQPRYKSGEQSADHI 159
++ S+ +++AF LDK GDG I +D++ ++ T + E S +H+
Sbjct: 42 LTSSQIQELKEAFALLDKDGDGNIGREDVK---TMLTSLNQDASEDSINHM 89
Score = 23.0 bits (47), Expect = 8.5
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 16 SRRSIVEQAFKKLDKTGDGLITIDDIRDVYS 108
S R+ + +AF D T G I I +RD S
Sbjct: 114 SPRNDLLEAFSTFDDTQSGKIPISTMRDALS 144
>SPCC1494.04c |tyr1||prephenate dehydrogenase [NADP+]
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 431
Score = 27.1 bits (57), Expect = 0.52
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +1
Query: 46 KKLDKTGDGLITIDDIRDVYSVATQPRYKSGEQS 147
+ +D+ GL+ D++ D YS++ P+ +S S
Sbjct: 277 ENMDRNSSGLLLSDELLDQYSISNIPKDESKRNS 310
>SPBC15D4.04 |gpt2|gpt,
alg7|UDP-N-acetylglucosamine--dolichyl-phosphateN-
acetylglucosaminephosphotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 446
Score = 26.6 bits (56), Expect = 0.69
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -2
Query: 249 IPXIVVHKLLQG--YLSINSSPRLEIGQKFIH-NMISRLFTALVSRLCSNRINIPYVVNG 79
IP +VV+ + G Y+S+ S R + + I+ + + A V+ C N INI VNG
Sbjct: 163 IPLLVVYYVDYGVTYVSVPSIVRPFLKRSLINLGFLYYFYMAAVAIFCPNSINIIAGVNG 222
>SPCC550.14 |||vigilin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1279
Score = 26.2 bits (55), Expect = 0.92
Identities = 14/44 (31%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = -2
Query: 189 RLEIGQKFIHNMISRLFTAL--VSRLCSNRINIPYVVNGD*TVT 64
++E+ Q+ I ++I R+ + + R S +NIP V++ + TVT
Sbjct: 1042 KIEVPQRCISSIIGRMGSTRRDIERKTSTMLNIPNVLDPEETVT 1085
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 24.6 bits (51), Expect = 2.8
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = -3
Query: 128 YLGCVATE*T---SRMSSMVIKPSPVLSNFLNA 39
YL +A+ T S++ +IK +PVL +F NA
Sbjct: 186 YLAAIASSTTVGSSQVEEQIIKTNPVLESFGNA 218
>SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 23.8 bits (49), Expect = 4.9
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 160 MNKFLANFESGGTVDGKVTLEEFMN 234
+++FLAN G ++ G +LEEF++
Sbjct: 42 VDEFLANEAKGKSIVGAHSLEEFVS 66
>SPAC1F3.02c |mkh1||MEK kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1116
Score = 23.4 bits (48), Expect = 6.5
Identities = 10/21 (47%), Positives = 13/21 (61%)
Frame = -3
Query: 89 SSMVIKPSPVLSNFLNACSTI 27
S +V + SP FLNAC T+
Sbjct: 1057 SELVSQVSPEAIQFLNACFTV 1077
>SPBC17G9.12c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 274
Score = 23.4 bits (48), Expect = 6.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = -2
Query: 261 IETLIPXIVVHKLLQGYLSINSSPRLEIGQKFIHN 157
I L+P + V K + LS+N S R+ I Q +H+
Sbjct: 106 INALVPDLRVSKTIFHVLSVNWSARV-IEQTLLHH 139
>SPAC821.13c ||SPAC955.01c|P-type ATPase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1562
Score = 23.4 bits (48), Expect = 6.5
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +2
Query: 47 RSWTKRVTV*SPLTTYGMFILLLHNRDTRAVNS---RLIIL 160
+S K T+ +PL F+ L +RDTR + S R+II+
Sbjct: 174 KSRHKEFTIPNPLQFISNFLSNLFSRDTRYLKSSHGRIIII 214
>SPAPB2B4.04c ||pmc1, pmc1|P-type ATPase, calcium transporting Pmc1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1292
Score = 23.4 bits (48), Expect = 6.5
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +1
Query: 73 LITIDDIRDVYSVATQPRYKSGEQSADH 156
++ + I V+S PR++S +S DH
Sbjct: 1147 VLPVKTIDTVFSWILNPRFRSKRRSTDH 1174
>SPBC1709.03 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 398
Score = 23.0 bits (47), Expect = 8.5
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 70 GLITIDDIRDVYSVATQPRYKSGE 141
G+I+I D VYS T YKS E
Sbjct: 126 GVISIHDSTGVYSQITTTPYKSLE 149
>SPAC22E12.16c |pik1||phosphatidylinositol kinase
Pik1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 851
Score = 23.0 bits (47), Expect = 8.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 61 TGDGLITIDDIRDVYSVATQPRYKSGEQSADHIM 162
T D L +DD D Y + +KS ++AD I+
Sbjct: 749 TADYLEILDDRFDEYRSLMKAAFKSVRKNADQII 782
>SPAC32A11.04c |tif212|tif22, SPAC6B12.17c|translation initiation
factor eIF2 beta subunit|Schizosaccharomyces pombe|chr
1|||Manual
Length = 321
Score = 23.0 bits (47), Expect = 8.5
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 130 KSGEQSADHIMNKFLANFESGGTVDGKVTL 219
K +S DH++ A + G+VDG L
Sbjct: 219 KRMHRSLDHVIQFLFAELGTSGSVDGSSRL 248
>SPBC2G2.08 |ade9||C-1-
tetrahydrofolatesynthase/methylenetetrahydrofolatedehydr
ogenase/methylenetetrahydrofolatecyclohydrolase/formylte
trahydrofolatesynthetase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 969
Score = 23.0 bits (47), Expect = 8.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -3
Query: 152 SADCSPLLYLGCVATE*TSRMSSMVI 75
+++C +L L C + SR+S MVI
Sbjct: 591 ASECMSILALSCDLNDMHSRLSRMVI 616
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,186,501
Number of Sequences: 5004
Number of extensions: 21675
Number of successful extensions: 61
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 2,362,478
effective HSP length: 62
effective length of database: 2,052,230
effective search space used: 65671360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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