Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_P04
         (617 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X03342-1|CAA27048.1|  135|Homo sapiens protein ( Human mRNA for ...    97   4e-20
BC070209-1|AAH70209.1|  135|Homo sapiens ribosomal protein L32 p...    97   4e-20
BC011514-1|AAH11514.1|  135|Homo sapiens ribosomal protein L32 p...    97   4e-20
AB061831-1|BAB79469.1|  135|Homo sapiens ribosomal protein L32 p...    97   4e-20
BC053996-1|AAH53996.1|   33|Homo sapiens RPL32P3 protein protein.      51   3e-06
BC015389-1|AAH15389.1|   82|Homo sapiens RPL32P3 protein protein.      49   1e-05
AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens ...    32   1.9  
BC117694-1|AAI17695.1| 1106|Homo sapiens DOCK4 protein protein.        29   9.9  
BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein.        29   9.9  
BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesi...    29   9.9  
AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein.                29   9.9  
AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens ...    29   9.9  

>X03342-1|CAA27048.1|  135|Homo sapiens protein ( Human mRNA for
           ribosomal protein L32. ).
          Length = 135

 Score = 97.1 bits (231), Expect = 4e-20
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +3

Query: 438 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFQGSIL 593
           A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRF+G IL
Sbjct: 3   ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQIL 54


>BC070209-1|AAH70209.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score = 97.1 bits (231), Expect = 4e-20
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +3

Query: 438 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFQGSIL 593
           A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRF+G IL
Sbjct: 3   ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQIL 54


>BC011514-1|AAH11514.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score = 97.1 bits (231), Expect = 4e-20
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +3

Query: 438 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFQGSIL 593
           A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRF+G IL
Sbjct: 3   ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQIL 54


>AB061831-1|BAB79469.1|  135|Homo sapiens ribosomal protein L32
           protein.
          Length = 135

 Score = 97.1 bits (231), Expect = 4e-20
 Identities = 42/52 (80%), Positives = 48/52 (92%)
 Frame = +3

Query: 438 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFQGSIL 593
           A+RP+ +P IVKKRTK+FIRHQSDRY K+KRNWRKPRGIDNRVRRRF+G IL
Sbjct: 3   ALRPLVKPKIVKKRTKKFIRHQSDRYVKIKRNWRKPRGIDNRVRRRFKGQIL 54


>BC053996-1|AAH53996.1|   33|Homo sapiens RPL32P3 protein protein.
          Length = 33

 Score = 51.2 bits (117), Expect = 3e-06
 Identities = 22/31 (70%), Positives = 27/31 (87%)
 Frame = +3

Query: 438 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLKR 530
           A+R + +P IVKKRTK+FIRHQSDRY K+KR
Sbjct: 3   ALRSLVKPKIVKKRTKKFIRHQSDRYVKIKR 33


>BC015389-1|AAH15389.1|   82|Homo sapiens RPL32P3 protein protein.
          Length = 82

 Score = 49.2 bits (112), Expect = 1e-05
 Identities = 21/30 (70%), Positives = 26/30 (86%)
 Frame = +3

Query: 438 AIRPVYRPTIVKKRTKRFIRHQSDRYDKLK 527
           A+R + +P IVKKRTK+FIRHQSDRY K+K
Sbjct: 3   ALRSLVKPKIVKKRTKKFIRHQSDRYVKIK 32


>AK124805-1|BAC85954.1|  189|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42815 fis, clone BRCAN2014143. ).
          Length = 189

 Score = 31.9 bits (69), Expect = 1.9
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 8/41 (19%)
 Frame = +3

Query: 240 HSLTFLCIFS--CLYNHIF---CI---IYTYNS*FIFLYPY 338
           H+  ++C++   C+Y H++   CI   +YTY   +I +YPY
Sbjct: 2   HTYIYMCVYPYICIYMHVYPCICIYLHVYTYICMYIHIYPY 42


>BC117694-1|AAI17695.1| 1106|Homo sapiens DOCK4 protein protein.
          Length = 1106

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 448 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNREVSTTEY 567
           LF D  SS+  RKD+++T  I+ I   G G  +   + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297


>BC117689-1|AAI17690.1| 2011|Homo sapiens DOCK4 protein protein.
          Length = 2011

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 448 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNREVSTTEY 567
           LF D  SS+  RKD+++T  I+ I   G G  +   + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297


>BC117688-1|AAI17689.1| 1966|Homo sapiens dedicator of cytokinesis 4
           protein.
          Length = 1966

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 448 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNREVSTTEY 567
           LF D  SS+  RKD+++T  I+ I   G G  +   + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297


>AY233380-1|AAO73565.1| 1966|Homo sapiens DOCK4 protein.
          Length = 1966

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = +1

Query: 448 LFTDRQSSKRGRKDLFVTSRIVMINLRGTGVNREVSTTEY 567
           LF D  SS+  RKD+++T  I+ I   G G  +   + +Y
Sbjct: 259 LFVDLGSSEL-RKDIYITVHIIRIGRMGAGEKKNACSVQY 297


>AK127397-1|BAC86958.1|  130|Homo sapiens protein ( Homo sapiens
           cDNA FLJ45488 fis, clone BRTHA2003759. ).
          Length = 130

 Score = 29.5 bits (63), Expect = 9.9
 Identities = 14/41 (34%), Positives = 23/41 (56%)
 Frame = +1

Query: 235 IIIH*LFYVFSHVYIITFFVSYIHIILDSYFYTLIKCITEI 357
           I ++  FY+F+++Y+  F   YI+I L  Y Y  +   T I
Sbjct: 33  IYLYIYFYIFTYIYLYIFI--YIYICLYIYLYIYLYIFTYI 71


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 77,397,650
Number of Sequences: 237096
Number of extensions: 1496658
Number of successful extensions: 7325
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7301
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)