Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_P04
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49 ...   106   1e-25
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              26   0.26 
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   5.5  

>AF441189-1|AAL73401.1|  134|Apis mellifera ribosomal protein 49
           protein.
          Length = 134

 Score =  106 bits (255), Expect = 1e-25
 Identities = 47/53 (88%), Positives = 50/53 (94%)
 Frame = +3

Query: 435 MAIRPVYRPTIVKKRTKRFIRHQSDRYDKLKRNWRKPRGIDNRVRRRFQGSIL 593
           MAIRPVYRPTIVKKRTK+FIRHQSDRY KLKRNWRKP+GIDNRVRRRF+G  L
Sbjct: 1   MAIRPVYRPTIVKKRTKKFIRHQSDRYSKLKRNWRKPKGIDNRVRRRFKGQYL 53



 Score = 29.5 bits (63), Expect = 0.027
 Identities = 11/12 (91%), Positives = 12/12 (100%)
 Frame = +1

Query: 580 KGQYLMPNIGHG 615
           KGQYLMPNIG+G
Sbjct: 49  KGQYLMPNIGYG 60


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 26.2 bits (55), Expect = 0.26
 Identities = 11/47 (23%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = -1

Query: 566 YSVVDTSR-FTPVPLKFIITIRLVTNKSFRPLFDDCRSVNRSDSHFK 429
           ++++D +  F P  +K ++ + L+   S + L  DC +++  + H K
Sbjct: 70  FNILDKNNVFKPQGIKAVMEL-LIDENSVKQLVSDCSTISEENPHLK 115


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = -2

Query: 478 LFLTIVGL*TGLIAILNYFTKKRGSEPP 395
           +F+TI     G+ + LN+F K   SE P
Sbjct: 63  VFITIPRWKNGVPSNLNFFLKNDESESP 90


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,030
Number of Sequences: 438
Number of extensions: 3124
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)