Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_O24
         (380 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL033514-36|CAH19095.1|  222|Caenorhabditis elegans Hypothetical...    27   4.5  
U41107-11|AAC71161.1|  454|Caenorhabditis elegans Hypothetical p...    27   6.0  
U41107-10|AAN39669.1|  416|Caenorhabditis elegans Hypothetical p...    27   6.0  
U41107-9|AAK73877.1|  471|Caenorhabditis elegans Hypothetical pr...    27   6.0  
U41107-8|AAN39670.1|  468|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical...    26   7.9  
AF039044-10|AAG24126.2|  149|Caenorhabditis elegans Hypothetical...    26   7.9  

>AL033514-36|CAH19095.1|  222|Caenorhabditis elegans Hypothetical
           protein Y75B8A.39 protein.
          Length = 222

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 11/45 (24%), Positives = 25/45 (55%)
 Frame = +2

Query: 161 VQVNMNNITSLGRHIQRGSKSNELLIKAAREMASTENQMESADEN 295
           +Q   NN  ++ + ++ G   ++ LIK  + +A  EN+++   E+
Sbjct: 81  LQYYNNNKQAIEKMVEHGKSQDQNLIKRQKALADAENELKVKKEH 125


>U41107-11|AAC71161.1|  454|Caenorhabditis elegans Hypothetical
           protein F55C12.1a protein.
          Length = 454

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 218 KSNELLIKAAREMASTENQMESADENLKKMQLISVHIGYQYENIHKSAQ 364
           +SNE   +   E+  TEN++E A   ++ M+   + +  Q+    + AQ
Sbjct: 154 RSNEETKRIRNELEKTENKLEEAQLLVEGMEEERIQLERQFRKFKEEAQ 202


>U41107-10|AAN39669.1|  416|Caenorhabditis elegans Hypothetical
           protein F55C12.1c protein.
          Length = 416

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 218 KSNELLIKAAREMASTENQMESADENLKKMQLISVHIGYQYENIHKSAQ 364
           +SNE   +   E+  TEN++E A   ++ M+   + +  Q+    + AQ
Sbjct: 116 RSNEETKRIRNELEKTENKLEEAQLLVEGMEEERIQLERQFRKFKEEAQ 164


>U41107-9|AAK73877.1|  471|Caenorhabditis elegans Hypothetical
           protein F55C12.1b protein.
          Length = 471

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 218 KSNELLIKAAREMASTENQMESADENLKKMQLISVHIGYQYENIHKSAQ 364
           +SNE   +   E+  TEN++E A   ++ M+   + +  Q+    + AQ
Sbjct: 171 RSNEETKRIRNELEKTENKLEEAQLLVEGMEEERIQLERQFRKFKEEAQ 219


>U41107-8|AAN39670.1|  468|Caenorhabditis elegans Hypothetical
           protein F55C12.1d protein.
          Length = 468

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = +2

Query: 218 KSNELLIKAAREMASTENQMESADENLKKMQLISVHIGYQYENIHKSAQ 364
           +SNE   +   E+  TEN++E A   ++ M+   + +  Q+    + AQ
Sbjct: 168 RSNEETKRIRNELEKTENKLEEAQLLVEGMEEERIQLERQFRKFKEEAQ 216


>AL132948-15|CAD31816.1| 1352|Caenorhabditis elegans Hypothetical
           protein Y39B6A.18 protein.
          Length = 1352

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 25/77 (32%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
 Frame = +2

Query: 167 VNMNNITSLGRHIQRGSKSNELLIKAAREMASTENQMESA-------DENLKKMQLISVH 325
           +  NNI SL + IQ   K  E   KA R + S +N + S        DENLKK+    ++
Sbjct: 446 IRSNNI-SLTK-IQESVKGIENQFKAVR-LDSLKNDVFSKISDVFRKDENLKKVITAEIN 502

Query: 326 IGYQYENIHKSAQVLSE 376
           +    +N+   + V+SE
Sbjct: 503 VNKCLQNLKNESLVISE 519


>AF039044-10|AAG24126.2|  149|Caenorhabditis elegans Hypothetical
           protein F48G7.2 protein.
          Length = 149

 Score = 26.2 bits (55), Expect = 7.9
 Identities = 16/58 (27%), Positives = 24/58 (41%)
 Frame = +2

Query: 206 QRGSKSNELLIKAAREMASTENQMESADENLKKMQLISVHIGYQYENIHKSAQVLSEI 379
           QR S      I+A  E+     Q+E    N  K  L S H     +  HK+ + L ++
Sbjct: 22  QRSSNCQIASIRANEEILLRAIQLEDQRINDSKKYLFSTHTREVIQKFHKTFEPLDDV 79


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,855,379
Number of Sequences: 27780
Number of extensions: 143330
Number of successful extensions: 398
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 395
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 398
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)