Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_O18
(254 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC052576-1|AAH52576.1| 874|Homo sapiens CTDP1 protein protein. 30 1.2
BC017175-1|AAH17175.1| 292|Homo sapiens FAM54B protein protein. 30 1.2
AB075880-1|BAD38662.1| 292|Homo sapiens putative protein produc... 30 1.2
BC063447-1|AAH63447.1| 867|Homo sapiens CTD (carboxy-terminal d... 29 2.0
AF154115-1|AAD42088.1| 961|Homo sapiens RNA polymerase II CTD p... 29 2.0
AF081287-1|AAC64549.1| 842|Homo sapiens serine phosphatase FCP1... 29 2.0
BC012977-1|AAH12977.1| 261|Homo sapiens CTD (carboxy-terminal d... 29 3.6
AF229163-3|AAG15404.1| 261|Homo sapiens nuclear LIM interactor-... 29 3.6
AF229162-1|AAG15402.1| 261|Homo sapiens nuclear LIM interactor-... 29 3.6
BC130407-1|AAI30408.1| 977|Homo sapiens endoplasmic reticulum t... 28 6.3
BC130405-1|AAI30406.1| 977|Homo sapiens endoplasmic reticulum t... 28 6.3
AF059198-1|AAC25991.1| 977|Homo sapiens protein kinase/endoribo... 28 6.3
AB209869-1|BAD93106.1| 1006|Homo sapiens endoplasmic reticulum t... 28 6.3
>BC052576-1|AAH52576.1| 874|Homo sapiens CTDP1 protein protein.
Length = 874
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -3
Query: 189 MELFTFGKTLITNCILGFTLSACFISRTRAVKPSLCSDSLSSTGVVPNVF 40
+ +FTFG L + I GF + R + C D +S TG + N+F
Sbjct: 155 LHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPISKTGNLRNLF 204
>BC017175-1|AAH17175.1| 292|Homo sapiens FAM54B protein protein.
Length = 292
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 101 ALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIGHIQA 244
++VR + L +KP + LPN++ DVP + L DI I A
Sbjct: 23 SVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVPTLADIAWIAA 70
>AB075880-1|BAD38662.1| 292|Homo sapiens putative protein product
of HYST1888 protein.
Length = 292
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 101 ALVREMKQALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIGHIQA 244
++VR + L +KP + LPN++ DVP + L DI I A
Sbjct: 23 SVVRRIGTNLPLKPCARASFETLPNISDLCLRDVPPVPTLADIAWIAA 70
>BC063447-1|AAH63447.1| 867|Homo sapiens CTD (carboxy-terminal
domain, RNA polymerase II, polypeptide A) phosphatase,
su protein.
Length = 867
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 189 MELFTFGKTLITNCILGFTLSACFISRTRAVKPSLCSDSLSSTGVVPNVF 40
+ +FTFG L + I GF + R + C D S TG + N+F
Sbjct: 242 LHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLF 291
>AF154115-1|AAD42088.1| 961|Homo sapiens RNA polymerase II CTD
phosphatase protein.
Length = 961
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 189 MELFTFGKTLITNCILGFTLSACFISRTRAVKPSLCSDSLSSTGVVPNVF 40
+ +FTFG L + I GF + R + C D S TG + N+F
Sbjct: 242 LHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLF 291
>AF081287-1|AAC64549.1| 842|Homo sapiens serine phosphatase FCP1a
protein.
Length = 842
Score = 29.5 bits (63), Expect = 2.0
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = -3
Query: 189 MELFTFGKTLITNCILGFTLSACFISRTRAVKPSLCSDSLSSTGVVPNVF 40
+ +FTFG L + I GF + R + C D S TG + N+F
Sbjct: 123 LHVFTFGSRLYAHTIAGFLDPEKKLFSHRILSRDECIDPFSKTGNLRNLF 172
>BC012977-1|AAH12977.1| 261|Homo sapiens CTD (carboxy-terminal
domain, RNA polymerase II, polypeptide A) small
phosphata protein.
Length = 261
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 27 GTASRKHSGLPLLMIRNQSIEKASPLLYV 113
G A HSG PLL+ N +I K +P+ Y+
Sbjct: 51 GEALPAHSGAPLLVEENGAIPKQTPVQYL 79
>AF229163-3|AAG15404.1| 261|Homo sapiens nuclear LIM
interactor-interacting factor protein.
Length = 261
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 27 GTASRKHSGLPLLMIRNQSIEKASPLLYV 113
G A HSG PLL+ N +I K +P+ Y+
Sbjct: 51 GEALPAHSGAPLLVEENGAIPKQTPVQYL 79
>AF229162-1|AAG15402.1| 261|Homo sapiens nuclear LIM
interactor-interacting factor protein.
Length = 261
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 27 GTASRKHSGLPLLMIRNQSIEKASPLLYV 113
G A HSG PLL+ N +I K +P+ Y+
Sbjct: 51 GEALPAHSGAPLLVEENGAIPKQTPVQYL 79
>BC130407-1|AAI30408.1| 977|Homo sapiens endoplasmic reticulum to
nucleus signaling 1 protein.
Length = 977
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 184 AIYVWQNAD--N*LHIGFYIECLFHLTYKSGE 95
A YVWQ +HI +E L +LT+ SGE
Sbjct: 228 AFYVWQREGLRKVMHINVAVETLRYLTFMSGE 259
>BC130405-1|AAI30406.1| 977|Homo sapiens endoplasmic reticulum to
nucleus signaling 1 protein.
Length = 977
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 184 AIYVWQNAD--N*LHIGFYIECLFHLTYKSGE 95
A YVWQ +HI +E L +LT+ SGE
Sbjct: 228 AFYVWQREGLRKVMHINVAVETLRYLTFMSGE 259
>AF059198-1|AAC25991.1| 977|Homo sapiens protein
kinase/endoribonulcease protein.
Length = 977
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 184 AIYVWQNAD--N*LHIGFYIECLFHLTYKSGE 95
A YVWQ +HI +E L +LT+ SGE
Sbjct: 228 AFYVWQREGLRKVMHINVAVETLRYLTFMSGE 259
>AB209869-1|BAD93106.1| 1006|Homo sapiens endoplasmic reticulum to
nucleus signalling 1 isoform 1 variant protein.
Length = 1006
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = -2
Query: 184 AIYVWQNAD--N*LHIGFYIECLFHLTYKSGE 95
A YVWQ +HI +E L +LT+ SGE
Sbjct: 257 AFYVWQREGLRKVMHINVAVETLRYLTFMSGE 288
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,688,355
Number of Sequences: 237096
Number of extensions: 612082
Number of successful extensions: 5005
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4969
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5005
length of database: 76,859,062
effective HSP length: 62
effective length of database: 62,159,110
effective search space used: 1367500420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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