Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_O18
(254 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical pr... 29 0.60
Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical pr... 27 1.4
AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical ... 27 1.4
AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical ... 27 1.4
AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical ... 27 1.4
Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z81062-6|CAB02949.2| 320|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z81035-10|CAB02733.2| 405|Caenorhabditis elegans Hypothetical p... 26 4.3
Z48367-1|CAA88323.1| 301|Caenorhabditis elegans Hypothetical pr... 25 7.4
U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1... 25 7.4
U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1... 25 7.4
U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1... 25 7.4
AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR... 25 7.4
AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein. 25 7.4
AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical ... 25 7.4
AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical ... 25 7.4
U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical pr... 25 9.8
U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical pr... 25 9.8
AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical ... 25 9.8
AF026215-7|ABR92608.1| 554|Caenorhabditis elegans Hypothetical ... 25 9.8
AF026215-6|AAB71325.1| 516|Caenorhabditis elegans Hypothetical ... 25 9.8
>Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical
protein C44H4.1 protein.
Length = 586
Score = 28.7 bits (61), Expect = 0.60
Identities = 11/36 (30%), Positives = 22/36 (61%)
Frame = -3
Query: 147 ILGFTLSACFISRTRAVKPSLCSDSLSSTGVVPNVF 40
ILG+ + F+S KP++ ++SS+G + N++
Sbjct: 520 ILGYLMRFIFLSYEAKTKPNVFGSTISSSGCIRNMY 555
>Z50858-6|CAD44135.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 167 LPNVNSSIYFDVPSIINLVDIGHIQAFD 250
LPNV + DVPS + + G+IQ FD
Sbjct: 839 LPNVPLEVQIDVPSSKVVNNCGYIQEFD 866
>AL021567-6|CAD44122.1| 949|Caenorhabditis elegans Hypothetical
protein F21A10.2c protein.
Length = 949
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 167 LPNVNSSIYFDVPSIINLVDIGHIQAFD 250
LPNV + DVPS + + G+IQ FD
Sbjct: 839 LPNVPLEVQIDVPSSKVVNNCGYIQEFD 866
>AL021567-2|CAD44121.1| 947|Caenorhabditis elegans Hypothetical
protein F21A10.2b protein.
Length = 947
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 167 LPNVNSSIYFDVPSIINLVDIGHIQAFD 250
LPNV + DVPS + + G+IQ FD
Sbjct: 837 LPNVPLEVQIDVPSSKVVNNCGYIQEFD 864
>AL021567-1|CAA16508.2| 898|Caenorhabditis elegans Hypothetical
protein F21A10.2a protein.
Length = 898
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 167 LPNVNSSIYFDVPSIINLVDIGHIQAFD 250
LPNV + DVPS + + G+IQ FD
Sbjct: 788 LPNVPLEVQIDVPSSKVVNNCGYIQEFD 815
>Z81016-4|CAB02662.2| 1885|Caenorhabditis elegans Hypothetical protein
F21G4.6 protein.
Length = 1885
Score = 26.6 bits (56), Expect = 2.4
Identities = 17/63 (26%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 68 DKESEHREGFTALVREMKQALNVKPNMQLVISVLPNVN-SSIYFDVPSIINLVDIGHIQA 244
D + EHR T ++++ AL+ + N + + +L N N + I+ + SI + + +
Sbjct: 1134 DDDLEHRLDITFRLQDLVDALSERFNSNMFLKLLGNTNLAGIHLNNLSIPKIKLMFDQVS 1193
Query: 245 FDY 253
FDY
Sbjct: 1194 FDY 1196
>Z81062-6|CAB02949.2| 320|Caenorhabditis elegans Hypothetical
protein F15A4.7 protein.
Length = 320
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 183 LFTFGKTLITNCILGFTLSACFISRTRAVKPSLCSDSLS 67
L G T++ + + L AC R R+++ SLC S+S
Sbjct: 204 LTALGFTIVCTSVTFYKL-ACLSDRVRSIERSLCFTSIS 241
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%)
Frame = +2
Query: 77 SEHREGFTALVREMKQALNVKPNMQLVISVLP--NVNSSIY-FDVPSIINLVDIGHIQAF 247
S ++ + + E+KQ L K ++ V+P V I FD+ +I+ +VD ++ +
Sbjct: 187 STYKSVYLHFICELKQQLQTKDKDYILSIVVPPPEVGGWIDGFDMNNIVQIVDFINVFSL 246
Query: 248 DY 253
DY
Sbjct: 247 DY 248
>Z81035-10|CAB02733.2| 405|Caenorhabditis elegans Hypothetical
protein C15H11.6 protein.
Length = 405
Score = 25.8 bits (54), Expect = 4.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -3
Query: 189 MELFTFGKTLITNCILGFTLSACFISRTRAVKP 91
M+ F L++ +LGFTL F A+KP
Sbjct: 317 MDTFVVDVFLVSATLLGFTLHGTFRDGPSAIKP 349
>Z48367-1|CAA88323.1| 301|Caenorhabditis elegans Hypothetical
protein C33B4.2 protein.
Length = 301
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -3
Query: 57 VVPNVFLMLCQKDPILERI 1
VVPNV L + KD I+ER+
Sbjct: 272 VVPNVNLFVVGKDKIMERL 290
>U39997-6|AAN60517.1| 942|Caenorhabditis elegans Clear protein 1,
isoform c protein.
Length = 942
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 35 IKKTFGTTPVDDKESEH 85
+K+TFG PVDD +E+
Sbjct: 766 LKQTFGAIPVDDLPTEY 782
>U39997-5|AAN60515.1| 1409|Caenorhabditis elegans Clear protein 1,
isoform a protein.
Length = 1409
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 35 IKKTFGTTPVDDKESEH 85
+K+TFG PVDD +E+
Sbjct: 766 LKQTFGAIPVDDLPTEY 782
>U39997-4|AAN60516.1| 1444|Caenorhabditis elegans Clear protein 1,
isoform b protein.
Length = 1444
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 35 IKKTFGTTPVDDKESEH 85
+K+TFG PVDD +E+
Sbjct: 801 LKQTFGAIPVDDLPTEY 817
>AF047881-1|AAC27552.1| 942|Caenorhabditis elegans truncated CLR-1
protein.
Length = 942
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 35 IKKTFGTTPVDDKESEH 85
+K+TFG PVDD +E+
Sbjct: 766 LKQTFGAIPVDDLPTEY 782
>AF047880-1|AAC27551.1| 1409|Caenorhabditis elegans CLR-1 protein.
Length = 1409
Score = 25.0 bits (52), Expect = 7.4
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +2
Query: 35 IKKTFGTTPVDDKESEH 85
+K+TFG PVDD +E+
Sbjct: 766 LKQTFGAIPVDDLPTEY 782
>AF025467-5|AAB71038.2| 1115|Caenorhabditis elegans Hypothetical
protein R148.3a protein.
Length = 1115
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 53 TTPVDDKESEHREGFTALVREMKQAL 130
TTP+ + SE+ + F A + E+K +L
Sbjct: 763 TTPISSENSENLKKFEAEIAELKASL 788
>AF025467-4|AAN65300.1| 1130|Caenorhabditis elegans Hypothetical
protein R148.3b protein.
Length = 1130
Score = 25.0 bits (52), Expect = 7.4
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +2
Query: 53 TTPVDDKESEHREGFTALVREMKQAL 130
TTP+ + SE+ + F A + E+K +L
Sbjct: 775 TTPISSENSENLKKFEAEIAELKASL 800
>U13875-8|AAN63443.1| 633|Caenorhabditis elegans Hypothetical
protein C26E6.7a protein.
Length = 633
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 198 SK*MELFTFGKTLITNCILGFTLSACFISRTRAVKPSLCSDSLSSTGVV 52
SK ++ F + N + L+ F+ +R +KP S ++SST V+
Sbjct: 432 SKRLDEFLICTVFLVNNLPKKILAQDFVEESRVLKPEGSSSAVSSTTVL 480
>U13875-7|AAN63444.1| 635|Caenorhabditis elegans Hypothetical
protein C26E6.7b protein.
Length = 635
Score = 24.6 bits (51), Expect = 9.8
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = -3
Query: 198 SK*MELFTFGKTLITNCILGFTLSACFISRTRAVKPSLCSDSLSSTGVV 52
SK ++ F + N + L+ F+ +R +KP S ++SST V+
Sbjct: 434 SKRLDEFLICTVFLVNNLPKKILAQDFVEESRVLKPEGSSSAVSSTTVL 482
>AL032634-1|CAC35856.2| 1195|Caenorhabditis elegans Hypothetical
protein Y39G8C.1 protein.
Length = 1195
Score = 24.6 bits (51), Expect = 9.8
Identities = 17/62 (27%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Frame = +2
Query: 62 VDDKESEHREGFTALVR-EMKQALNVKPNMQLVISVLPNVNSSIYF-DVPSIINLVDIGH 235
+ E + +G VR E+ Q P Q+ +LPNV +YF P++ +L +G
Sbjct: 666 ISSPEPPNSQGQWRTVRSEIPQDSFRIPRSQVKWGLLPNVKMDVYFPGFPTMKHLSHLGE 725
Query: 236 IQ 241
++
Sbjct: 726 LR 727
>AF026215-7|ABR92608.1| 554|Caenorhabditis elegans Hypothetical
protein F09G2.8b protein.
Length = 554
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 123 CFISRTRAVKPSLCSDSLSSTGVVPNVFLMLCQKDPILERI 1
C SR R +KP+ S+ S ++ VFL L ++ + I
Sbjct: 113 CGNSRNRIIKPACVPISIVSLFIIALVFLPLFNEEDLASPI 153
>AF026215-6|AAB71325.1| 516|Caenorhabditis elegans Hypothetical
protein F09G2.8 protein.
Length = 516
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 123 CFISRTRAVKPSLCSDSLSSTGVVPNVFLMLCQKDPILERI 1
C SR R +KP+ S+ S ++ VFL L ++ + I
Sbjct: 75 CGNSRNRIIKPACVPISIVSLFIIALVFLPLFNEEDLASPI 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,708,686
Number of Sequences: 27780
Number of extensions: 93949
Number of successful extensions: 247
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 247
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 230791218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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