Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_O15
         (494 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000059-1|AAH00059.2|  771|Homo sapiens CELSR1 protein protein.       31   1.7  
AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven...    31   1.7  
AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven...    31   1.7  
AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven...    31   1.7  
AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo ...    31   1.7  
AK128037-1|BAC87242.1| 1111|Homo sapiens protein ( Homo sapiens ...    31   2.9  
BC110511-1|AAI10512.1|  160|Homo sapiens C10orf76 protein protein.     30   3.8  
AL391827-3|CAI16232.1|  689|Homo sapiens novel protein protein.        30   3.8  
AK023176-1|BAB14447.1|  265|Homo sapiens protein ( Homo sapiens ...    30   3.8  

>BC000059-1|AAH00059.2|  771|Homo sapiens CELSR1 protein protein.
          Length = 771

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +1

Query: 16  AVLSYTKQDVFVFSMKHNTL*STN-LNYSLKLDLP 117
           AVLS TK DVFVF+++++T  S+N LN +    LP
Sbjct: 607 AVLSTTKDDVFVFNVQNDTDVSSNILNVTFSALLP 641


>AL031597-2|CAI23555.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
            G-type receptor 1 (flamingo homolog, Drosophila) protein.
          Length = 3014

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +1

Query: 16   AVLSYTKQDVFVFSMKHNTL*STN-LNYSLKLDLP 117
            AVLS TK DVFVF+++++T  S+N LN +    LP
Sbjct: 1233 AVLSTTKDDVFVFNVQNDTDVSSNILNVTFSALLP 1267


>AL031588-3|CAI19319.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
            G-type receptor 1 (flamingo homolog, Drosophila) protein.
          Length = 3014

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +1

Query: 16   AVLSYTKQDVFVFSMKHNTL*STN-LNYSLKLDLP 117
            AVLS TK DVFVF+++++T  S+N LN +    LP
Sbjct: 1233 AVLSTTKDDVFVFNVQNDTDVSSNILNVTFSALLP 1267


>AL021392-2|CAI20967.1| 3014|Homo sapiens cadherin, EGF LAG seven-pass
            G-type receptor 1 (flamingo homolog, Drosophila) protein.
          Length = 3014

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +1

Query: 16   AVLSYTKQDVFVFSMKHNTL*STN-LNYSLKLDLP 117
            AVLS TK DVFVF+++++T  S+N LN +    LP
Sbjct: 1233 AVLSTTKDDVFVFNVQNDTDVSSNILNVTFSALLP 1267


>AF231024-1|AAF61930.1| 3014|Homo sapiens protocadherin Flamingo 2
            protein.
          Length = 3014

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 18/35 (51%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
 Frame = +1

Query: 16   AVLSYTKQDVFVFSMKHNTL*STN-LNYSLKLDLP 117
            AVLS TK DVFVF+++++T  S+N LN +    LP
Sbjct: 1233 AVLSTTKDDVFVFNVQNDTDVSSNILNVTFSALLP 1267


>AK128037-1|BAC87242.1| 1111|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46156 fis, clone TESTI4001569. ).
          Length = 1111

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
 Frame = +1

Query: 331 EYCALTKLPCIGIICLLSLQ*IYISN-ICLI*NYLKYVL 444
           E   LT+LPC+  +CL   Q  Y +N +CL+ NY  +VL
Sbjct: 182 ELTNLTRLPCLKDLCLNDPQ--YTTNPVCLLCNYSTHVL 218


>BC110511-1|AAI10512.1|  160|Homo sapiens C10orf76 protein protein.
          Length = 160

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 7/31 (22%), Positives = 18/31 (58%)
 Frame = -2

Query: 481 ICCISSYEIHILITHILDNFKLSRYLKCISI 389
           +C +    +  ++TH++  F +  Y++CI +
Sbjct: 20  VCAVLDLMVEFIVTHMMKEFPMDLYIRCIQV 50


>AL391827-3|CAI16232.1|  689|Homo sapiens novel protein protein.
          Length = 689

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 7/31 (22%), Positives = 18/31 (58%)
 Frame = -2

Query: 481 ICCISSYEIHILITHILDNFKLSRYLKCISI 389
           +C +    +  ++TH++  F +  Y++CI +
Sbjct: 444 VCAVLDLMVEFIVTHMMKEFPMDLYIRCIQV 474


>AK023176-1|BAB14447.1|  265|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13114 fis, clone NT2RP3002603. ).
          Length = 265

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 7/31 (22%), Positives = 18/31 (58%)
 Frame = -2

Query: 481 ICCISSYEIHILITHILDNFKLSRYLKCISI 389
           +C +    +  ++TH++  F +  Y++CI +
Sbjct: 20  VCAVLDLMVEFIVTHMMKEFPMDLYIRCIQV 50


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,854,340
Number of Sequences: 237096
Number of extensions: 1051645
Number of successful extensions: 4757
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 4729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4757
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4479766258
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)