Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_O15
         (494 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine re...    28   3.2  
Z83123-6|CAD45601.1|  327|Caenorhabditis elegans Hypothetical pr...    27   9.9  
AC006810-5|AAF59629.2|  516|Caenorhabditis elegans Cytochrome p4...    27   9.9  

>AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein37 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 3.2
 Identities = 26/72 (36%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
 Frame = +1

Query: 244 IFNCNGELIFMILHFIYC*IFSFMIFKVLEYCALTKLP-CIGIICLLSLQ*IYISNICLI 420
           I+N N E  F +   IY  IF   I+ +  YC LTK P   GI+  +    IY+  IC  
Sbjct: 8   IWNENPETYFTV-KTIYA-IFVTPIYPLAHYCVLTKSPKSFGILKWI----IYVHCICFT 61

Query: 421 *NYLKYVLSICV 456
             +L  V  I V
Sbjct: 62  CEWLGNVFLIDV 73


>Z83123-6|CAD45601.1|  327|Caenorhabditis elegans Hypothetical
           protein T04A11.12 protein.
          Length = 327

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
 Frame = +1

Query: 256 NGELIFMILHFI--YC*IFSFMIFKVLEYCALTKLP 357
           NG+L+   + FI  Y  IF+F +F  + YC+    P
Sbjct: 152 NGQLLRFSIPFICVYPIIFTFFMFPAIGYCSYAAYP 187


>AC006810-5|AAF59629.2|  516|Caenorhabditis elegans Cytochrome p450
           family protein 32B1 protein.
          Length = 516

 Score = 26.6 bits (56), Expect = 9.9
 Identities = 17/58 (29%), Positives = 28/58 (48%)
 Frame = +1

Query: 217 FSGLTTY*QIFNCNGELIFMILHFIYC*IFSFMIFKVLEYCALTKLPCIGIICLLSLQ 390
           F+ L  Y +IF   G+++  +L       FSF I   ++ CAL  +    + C +S Q
Sbjct: 150 FAVLKEYQKIFGAQGKILVEVLQLRANNKFSFDIMPYIKRCALDIICETAMGCSISSQ 207


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,746,477
Number of Sequences: 27780
Number of extensions: 173698
Number of successful extensions: 224
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 224
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 935344784
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)