Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_O12
         (667 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   6.0  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            22   6.0  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   8.0  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   8.0  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   8.0  
AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.            21   8.0  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    21   8.0  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 13/49 (26%), Positives = 20/49 (40%)
 Frame = -3

Query: 350 TLGLLSFLGHHSILEHQGHHLTLEDHLFQEHRVVLVLLFDHKRLLQVHL 204
           T+G +  +  H   +     L  E+ LF    V   L FD++   Q  L
Sbjct: 144 TMGQIREVARHFYHKELQIELVREEILFDTVHVTFKLTFDNRAFTQASL 192


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/28 (28%), Positives = 13/28 (46%)
 Frame = -2

Query: 666 GIVLNFRTHEPAYPRSWLCAFSFPSIYN 583
           G +L+   H+      W+C   +  IYN
Sbjct: 362 GNILSPSIHDNICSNGWICEHRWRQIYN 389


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 245 PGPRGVPGIDG 277
           PGP GVPG  G
Sbjct: 332 PGPPGVPGDHG 342


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 245 PGPRGVPGIDG 277
           PGP GVPG  G
Sbjct: 332 PGPPGVPGDHG 342


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +3

Query: 354  LVRKDNQDLRVHKASKEYRVNEEKSVLLEEMAHL 455
            ++  DN  L + K    +R+N E +   EEM  L
Sbjct: 1062 MIPDDNTSLALPKNEGPFRLNVETAKTNEEMWEL 1095


>AF134816-1|AAD40232.1|   50|Apis mellifera unknown protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 233 DHKRLLQVHLYHLCSLV 183
           DH   +   +YHLC++V
Sbjct: 33  DHNGSIYWSMYHLCTVV 49


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +2

Query: 245 PGPRGVPGIDG 277
           PGP GVPG  G
Sbjct: 271 PGPPGVPGDHG 281


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,762
Number of Sequences: 438
Number of extensions: 4221
Number of successful extensions: 19
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)