Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_O10
         (526 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81115-1|CAB03291.1|  365|Caenorhabditis elegans Hypothetical pr...    28   4.7  
D83738-1|BAA12091.1|  366|Caenorhabditis elegans aldolase Ce1 pr...    28   4.7  
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z81115-1|CAB03291.1|  365|Caenorhabditis elegans Hypothetical
           protein T05D4.1 protein.
          Length = 365

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -2

Query: 147 NATVT*GRGFLTAVPQFHSRGSLDTNINSSKETNARDNLASFLQ 16
           NA VT G+G L A     S GS+D  +NS    N  +N   + Q
Sbjct: 21  NAIVTPGKGILAAD---ESTGSMDKRLNSIGLENTEENRRKYRQ 61


>D83738-1|BAA12091.1|  366|Caenorhabditis elegans aldolase Ce1
           protein.
          Length = 366

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = -2

Query: 147 NATVT*GRGFLTAVPQFHSRGSLDTNINSSKETNARDNLASFLQ 16
           NA VT G+G L A     S GS+D  +NS    N  +N   + Q
Sbjct: 21  NAIVTPGKGILAAD---ESTGSMDKRLNSIGLENTEENRRKYRQ 61


>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
           protein C50F2.2 protein.
          Length = 1029

 Score = 27.1 bits (57), Expect = 8.2
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -2

Query: 315 SH*SFTIKMILNK*DCRSNPRTNSNSKMAAPNNEPFLK 202
           SH  F +K I  K D  S P+T S S  + PN +P +K
Sbjct: 456 SHFEFKVKPIEKK-DA-SPPKTTSTSSASPPNPDPAMK 491


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,535,385
Number of Sequences: 27780
Number of extensions: 223621
Number of successful extensions: 459
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 452
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 459
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1028310386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)