Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_O09
(484 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|ch... 31 0.069
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 30 0.21
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 29 0.37
SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40 |Schi... 28 0.85
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 27 1.1
SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4 |S... 27 1.1
SPBC29A10.06c |||conserved fungal protein|Schizosaccharomyces po... 27 2.0
SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr 2|||... 26 3.4
SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomy... 26 3.4
SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit Sf... 26 3.4
SPAC29B12.03 |spd1||ribonucleotide reductase |Schizosaccharomyce... 26 3.4
SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces... 25 4.5
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 25 6.0
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 25 7.9
SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual 25 7.9
SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|c... 25 7.9
>SPBC119.12 |||Golgi matrix protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 401
Score = 31.5 bits (68), Expect = 0.069
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +2
Query: 230 LNNQNQPNIYKPTGQAKHYESAYSYHKEWEKHDTKPTENPLPKNSELYEDSQAHLSGQQ 406
L NQ+Q I + +A H E+ + W+K TE K+ E YED Q L Q
Sbjct: 213 LTNQHQLEIELESTKASHTENLGELTRNWQKAMDDVTEKFASKSKE-YEDLQNELDATQ 270
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 29.9 bits (64), Expect = 0.21
Identities = 19/101 (18%), Positives = 39/101 (38%)
Frame = +2
Query: 167 LNTAQTGAAYDQSSVNSEAEILNNQNQPNIYKPTGQAKHYESAYSYHKEWEKHDTKPTEN 346
+N+ + + D + N+ E + Q N + + + K Y Y ++ +
Sbjct: 19 INSDEFEDSMDVTEFNNPGEE-STYPQANSWNDSNKTKDIAEYYDYSWSGQREANQQIPQ 77
Query: 347 PLPKNSELYEDSQAHLSGQQYDSTAIDSQNSHLSNAYSGFN 469
P+P ++ ++G+ Y S A D S A + N
Sbjct: 78 PVPVQPRYPDEQNFSMNGETYPSEAYDYDYSGQEEAINAMN 118
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 29.1 bits (62), Expect = 0.37
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = -1
Query: 151 WYMHFCSRAYYNSNWHCSNLSALSVY 74
W+ CS + + WH LS +S Y
Sbjct: 195 WFATICSETHIENEWHVGPLSVVSAY 220
>SPBC1711.05 |||nucleocytoplasmic transport chaperone Srp40
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 451
Score = 27.9 bits (59), Expect = 0.85
Identities = 28/158 (17%), Positives = 68/158 (43%)
Frame = +2
Query: 2 SQSGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVHVPIATQSLNTAQ 181
S S S +SS + ++++S SSD + S + + ++ S ++++
Sbjct: 167 SSSSSESESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSEGSDSSSSSSSSE 226
Query: 182 TGAAYDQSSVNSEAEILNNQNQPNIYKPTGQAKHYESAYSYHKEWEKHDTKPTENPLPKN 361
+ ++ + + +S + +++ + + ES S ++ +E+ +
Sbjct: 227 SESSSEDNDSSSSSSDSESESSSEDSDSSSSSSDSESESSSKDSDSSSNSSDSEDDSSSD 286
Query: 362 SELYEDSQAHLSGQQYDSTAIDSQNSHLSNAYSGFNTN 475
S DS++ S + DST+ S + S++ G N+N
Sbjct: 287 SS---DSESESSSEDSDSTSSSSDSDSSSSSEDG-NSN 320
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 27.5 bits (58), Expect = 1.1
Identities = 22/86 (25%), Positives = 31/86 (36%)
Frame = +2
Query: 44 NTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVHVPIATQSLNTAQTGAAYDQSSVNSEA 223
+ ++HS D A S I+ +P T P T + + + QS N
Sbjct: 355 DVDTHSEDNASTASSEAISQSMRSFQPQPNTGSPFPRFTSTNTEDEQESDIPQSDANDST 414
Query: 224 EILNNQNQPNIYKPTGQAKHYESAYS 301
LN N N+ PT Q YS
Sbjct: 415 VNLNQPNYANL-TPTPQVSPKRPTYS 439
>SPBC32H8.11 |mei4||meiotic forkhead transcription factor Mei4
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 517
Score = 27.5 bits (58), Expect = 1.1
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Frame = +2
Query: 122 IRPGTKVHVPIATQS--LNTAQTGAAYDQSSVNSEAEILNNQNQPN 253
I+P T +P+A + LN+ + + SS N AE+ N+ +QP+
Sbjct: 191 IKPLTTREIPLARKRSRLNSFNSSTSTSGSSSNVAAEVSNDASQPS 236
>SPBC29A10.06c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 2.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 296 YSYHKEWEKHDTKPTENPLPKNSELYEDSQAHLSGQQYD 412
Y K+WEK +T + LPKN + D +L +++
Sbjct: 91 YYLLKDWEKSETYSEQVSLPKNYQHLMDGYYYLDRLKFE 129
>SPBC4.06 |||acid phosphatase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 3.4
Identities = 13/54 (24%), Positives = 24/54 (44%)
Frame = +2
Query: 302 YHKEWEKHDTKPTENPLPKNSELYEDSQAHLSGQQYDSTAIDSQNSHLSNAYSG 463
+ + W + P EN P+ +LYE+ A + + YD + +S +G
Sbjct: 179 FTRNWSDENLLPNENNCPRLVQLYEEF-AERAAKLYDPLLAGRASEMMSQFMNG 231
>SPAC13C5.02 |dre4||DNA replication protein Dre4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 411
Score = 25.8 bits (54), Expect = 3.4
Identities = 22/97 (22%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Frame = +2
Query: 140 VHVPIATQSLNTAQTGAAYDQSSVNSEAEILNNQNQPNIYKPTGQAKHYESAYSYHKE-W 316
+ +PI Q + D N E + Q I +P+G + E + Y +E +
Sbjct: 130 LRLPIRKQISKDSSQSQNVDSGKTNHEEIHESRHLQTEIEEPSGLEESSEESVLYSEEFY 189
Query: 317 EKHDTKPTENPLPKNSEL-YEDSQAHLSGQQYDSTAI 424
EK D + E EL + + QQ D +
Sbjct: 190 EKSDEEEDEEKSHSAEELEFGEEDIMYQLQQLDDETV 226
>SPBC336.07 |sfc3||transcription factor TFIIIC complex subunit
Sfc3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1339
Score = 25.8 bits (54), Expect = 3.4
Identities = 17/71 (23%), Positives = 30/71 (42%)
Frame = +2
Query: 215 SEAEILNNQNQPNIYKPTGQAKHYESAYSYHKEWEKHDTKPTENPLPKNSELYEDSQAHL 394
S EIL + + + + T ++ + E +TKP + K +E +D L
Sbjct: 770 STPEILKDVDVDFLKRNTSLSRRKSMPAEIKRHKESSETKPVDKEEVKKNEKEKDDPMRL 829
Query: 395 SGQQYDSTAID 427
+ Q +S A D
Sbjct: 830 AQQLLESLAPD 840
>SPAC29B12.03 |spd1||ribonucleotide reductase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 124
Score = 25.8 bits (54), Expect = 3.4
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = +2
Query: 131 GTKVHVPIATQSLNTAQTGAAYDQSSVNSEAEILNNQNQPNIYKPTGQAKHYESA 295
G +V I+T + T AY+ N+ +E + +N Y+P G + +E A
Sbjct: 37 GMRVRKSISTGYKSKQTTFPAYNPPLYNTVSENIALKNTAFSYEPNGTKRPFEQA 91
>SPBC1709.08 |cft1||cleavage factor one Cft1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1441
Score = 25.4 bits (53), Expect = 4.5
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +2
Query: 8 SGSHRQSSYDHSNTNSHSSDYAVNTQSRQITAMPVRVIIRPGTKVH 145
SG+ R +YD N SHS + V I + + I P K H
Sbjct: 1275 SGNLRLLAYDPENPESHSGERLVTRGDFHIGNVITAMTILPKEKKH 1320
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 25.0 bits (52), Expect = 6.0
Identities = 18/81 (22%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Frame = +2
Query: 248 PNIYKPTGQAKHYESAYSY---HKEWEKHDTKPTENPLP-KNSELYEDSQAHLSGQQYDS 415
P I +PT + H++S++S H + + ++ + NP+ + ++ S H ++ ++
Sbjct: 60 PAIRQPTESSTHFQSSHSVSNAHNQSPLNQSQSSANPVTFEIADEPSPSFNHSFFEKDNA 119
Query: 416 TAIDSQNSHLSNAYSGFNTNA 478
I Q SH N S ++++
Sbjct: 120 RDIPQQPSHSQNPSSSSSSSS 140
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 24.6 bits (51), Expect = 7.9
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 273 KLSTTNQRTVTTRNGKNMIQNLQRILFLK 359
+LS TNQ VTT G+ + Q + +L+
Sbjct: 131 ELSKTNQHPVTTEEGQAVAQKIGAYKYLE 159
>SPBC19G7.08c |||arrestin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 24.6 bits (51), Expect = 7.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +2
Query: 296 YSYHKEWEKHDTKPTENPLPKNSELYEDSQAHLSG 400
Y+ H+ W P E P P+NSE+ + + SG
Sbjct: 203 YATHRVWSMD--LPFEIPFPENSEIPSTFELNRSG 235
>SPBC2F12.15c |||palmitoyltransferase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 329
Score = 24.6 bits (51), Expect = 7.9
Identities = 14/50 (28%), Positives = 28/50 (56%)
Frame = -1
Query: 253 VGLILVIQNFSFAIY*TLIISSTSLCCIKTLSSDWYMHFCSRAYYNSNWH 104
VG+ +V+ F+F Y T ++ +L ++++SS W + S +N W+
Sbjct: 191 VGMSIVMTAFTF--YHTSLLIH-NLSTLESMSSSWSRYTHSTQPFNVGWY 237
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,816,821
Number of Sequences: 5004
Number of extensions: 35067
Number of successful extensions: 149
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 149
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 186042952
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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