Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_O09
(484 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1514 - 37892552-37893074,37893291-37893367,37893471-378935... 31 0.48
01_06_1480 - 37660591-37660720,37660899-37660930,37661061-376611... 30 0.85
03_01_0238 + 1854070-1854344,1854621-1854712,1854852-1855045,185... 30 1.1
01_01_1010 - 7996921-7997673,7999212-7999399,7999688-7999784,800... 29 1.5
03_02_0481 + 8789890-8789949,8790325-8790441,8790532-8790601,879... 29 2.0
12_01_0651 - 5507935-5509638 29 2.6
01_06_0916 + 32950575-32950656,32952061-32952272,32952408-329524... 29 2.6
01_01_0690 - 5306754-5307047,5307107-5307279,5308223-5308370,530... 28 4.5
07_01_0755 - 5806614-5806939,5807039-5809415 27 6.0
02_05_0877 + 32403363-32404662,32406545-32406630,32406709-324070... 27 6.0
11_06_0244 + 21652030-21652302,21652478-21652645,21652993-21653169 27 7.9
08_02_0124 - 12823791-12824213 27 7.9
08_01_0409 + 3625071-3625228,3625829-3625905,3626310-3626889,362... 27 7.9
02_04_0614 - 24400284-24400568,24400669-24400932,24401040-244011... 27 7.9
02_04_0545 + 23778769-23779245,23779395-23779688 27 7.9
>01_06_1514 -
37892552-37893074,37893291-37893367,37893471-37893587,
37893826-37893926,37895077-37895146,37895318-37895415,
37896326-37896419,37896792-37896882,37897222-37897547,
37898193-37898278,37899078-37899417
Length = 640
Score = 31.1 bits (67), Expect = 0.48
Identities = 25/94 (26%), Positives = 41/94 (43%), Gaps = 1/94 (1%)
Frame = +2
Query: 53 SHSSDYAVNTQSRQITAMPVRVIIRPGTKVHVPIATQSLNTAQTGAAYDQSSVNSEAEIL 232
S SS NT+ ++P V +KV+ + + + AQ A +++ + I
Sbjct: 404 SRSSSIPPNTRDALYQSLPPTVKSSLRSKVNSFVVNEEVTAAQIKAEMEKT-LRWLVPIA 462
Query: 233 NNQNQPNIY-KPTGQAKHYESAYSYHKEWEKHDT 331
NN + + KPTGQ YH + EK +T
Sbjct: 463 NNTTKSEVNCKPTGQMDLTRIETLYHADKEKTET 496
>01_06_1480 - 37660591-37660720,37660899-37660930,37661061-37661155,
37661460-37661527,37661608-37661694,37662884-37662912,
37663019-37663138,37663854-37663905,37663986-37664050,
37664174-37664536,37664637-37664711,37664803-37664940,
37665025-37665181,37665471-37665478,37665576-37665710,
37665965-37666082,37666791-37666915,37667571-37667717,
37668297-37668380,37668671-37668800,37669196-37669347,
37669678-37669857,37670660-37670731,37671104-37671295,
37671366-37671411,37671498-37671647,37671725-37671882,
37671995-37672101,37672191-37672407,37672484-37672696,
37672852-37672972,37673072-37673253,37673475-37673672,
37674770-37674967
Length = 1447
Score = 30.3 bits (65), Expect = 0.85
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 158 TQSLNTAQTGAAYDQSSVNSEAEILNNQNQPNIYKPTGQAKHYESAYSYHKEWE 319
T+ + A G A + S++S +L NQN+P TG+ + E+ ++Y E
Sbjct: 1168 TKLSSPASLGLAKEADSIDS-ISLLENQNRPESRSSTGETRASETDHNYSNRRE 1220
>03_01_0238 +
1854070-1854344,1854621-1854712,1854852-1855045,
1855529-1855568,1855734-1855815,1856972-1857049,
1857144-1857269,1857544-1857665,1858018-1858057,
1858250-1858324,1858414-1858585
Length = 431
Score = 29.9 bits (64), Expect = 1.1
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 287 ESAYSYHKEWEKHDTKP-TENPLPKNSELYEDSQAHLSGQQYD 412
E+A Y K WEK+D K TE K L E S G+ YD
Sbjct: 246 ENAGWYEKWWEKYDAKGWTEKGAHKYGRLNEQSWWERWGEHYD 288
>01_01_1010 -
7996921-7997673,7999212-7999399,7999688-7999784,
8000420-8000767,8001130-8001231,8001432-8001501,
8001747-8001802,8001891-8002010
Length = 577
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +2
Query: 278 KHYESAYSYHKEWEKHDTKPTENPLPKNSELYEDSQAHLSGQQYDST 418
K+++++ H + HDT + LPK S + D+ H + + +D++
Sbjct: 69 KNHDTSLVSHDPSKNHDTSHVSHDLPKVSSVKPDNTIHDTEEDHDTS 115
>03_02_0481 +
8789890-8789949,8790325-8790441,8790532-8790601,
8790688-8790836,8791520-8791621,8791692-8791892,
8792589-8792651,8792791-8793009,8793681-8793755,
8794003-8794101,8794521-8794691
Length = 441
Score = 29.1 bits (62), Expect = 2.0
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +2
Query: 143 HVPIATQSLNTAQTGAAYDQS-SVNSEAEILNNQNQPNIYKPTGQAKHYE 289
HV Q++ Q A Y+Q S+ EAE+ +QN +Y T AKH++
Sbjct: 14 HVAKQQQAVRK-QFSARYNQDPSLVDEAELECHQNLQRLYNSTRAAKHFQ 62
>12_01_0651 - 5507935-5509638
Length = 567
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 4/48 (8%)
Frame = +3
Query: 216 AKLKF*ITKINPTYINQLGKLSTTN----QRTVTTRNGKNMIQNLQRI 347
A ++ I ++ P + N LG+L+ ++ Q V T +GK +IQNL+ +
Sbjct: 362 ATSRYMIAELQP-FSNDLGELAISSSDILQELVATSDGKELIQNLEHL 408
>01_06_0916 +
32950575-32950656,32952061-32952272,32952408-32952448,
32952916-32952959,32953259-32953561,32954145-32954302,
32954849-32954965,32955562-32955747,32955872-32956031,
32956079-32956151,32958613-32958889,32959024-32959099,
32960653-32960720,32961270-32961361,32961505-32961578,
32961777-32961820,32962155-32962206,32962585-32962704,
32962777-32962889,32963023-32963110,32963492-32963577,
32964172-32964258,32964491-32964594,32964996-32965098,
32965250-32965345,32965456-32965645,32965777-32965838,
32966014-32966118,32966782-32966983,32967092-32967300,
32968510-32968673,32968799-32968850,32968935-32969021,
32969319-32969441,32969567-32969605,32969606-32969860
Length = 1447
Score = 28.7 bits (61), Expect = 2.6
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Frame = +2
Query: 200 QSSVNSEAEILNNQNQPNI----YKPTGQAKHYESA-YSYHK----EWEKHDTKPTENPL 352
Q +V E + ++++++ N+ ++ KH S + YHK WE +TKP E L
Sbjct: 642 QDAVLREIKAVDSEHKKNLLSDGWRMYQLQKHLASKDHPYHKFSTGSWETLETKPKERGL 701
Query: 353 PKNSEL---YEDSQAHLSG-QQYDSTAIDSQNSHLSNAYSGF-NTNAHS 484
EL YE+ A+L Y ++D S + +S NT+ S
Sbjct: 702 DIRQELLKFYENYSANLMHLVVYGKESLDCIQSFVERLFSDIKNTDQRS 750
>01_01_0690 -
5306754-5307047,5307107-5307279,5308223-5308370,
5309110-5309356,5309694-5309839,5312482-5312707,
5313652-5313874,5314054-5314202,5315345-5315514,
5316064-5316135,5317610-5317741,5317813-5317900,
5319440-5319656,5320123-5320306,5320644-5320727,
5321148-5321242,5321519-5321562,5321707-5322367,
5323053-5323356
Length = 1218
Score = 27.9 bits (59), Expect = 4.5
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +3
Query: 252 TYINQLGKLSTTNQRTVTTRNGKNMIQNLQRILFLKIVNFMKIRKRTYLDNNM 410
TY G S + V+ RN K + +Q + +IV+ RT+ NN+
Sbjct: 644 TYPELSGVQSVNSLDIVSARNAKKSLSGVQSVNSFEIVSTSNRSGRTFTSNNL 696
>07_01_0755 - 5806614-5806939,5807039-5809415
Length = 900
Score = 27.5 bits (58), Expect = 6.0
Identities = 12/52 (23%), Positives = 24/52 (46%)
Frame = +2
Query: 152 IATQSLNTAQTGAAYDQSSVNSEAEILNNQNQPNIYKPTGQAKHYESAYSYH 307
+ + L + + Q+ + E E L++ N PN+ +P G + + A H
Sbjct: 642 VCVKKLKSVDRAVIHHQTKMIWELECLSHINHPNLVRPIGYVIYEDVALLLH 693
>02_05_0877 + 32403363-32404662,32406545-32406630,32406709-32407077,
32407174-32407257,32407362-32407784,32408368-32408434,
32409238-32409430,32409577-32409680,32409787-32409990,
32410174-32410427,32410511-32410735,32410812-32411033,
32411109-32411162,32411337-32411402,32411496-32411633,
32411979-32412032,32412334-32412393,32412975-32413340,
32413415-32413582
Length = 1478
Score = 27.5 bits (58), Expect = 6.0
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 444 KCEFCESIAVESYCCPDKCAC 382
KCE CE I+ E C D+ C
Sbjct: 1122 KCELCEDISPEDTCVGDQSDC 1142
>11_06_0244 + 21652030-21652302,21652478-21652645,21652993-21653169
Length = 205
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -3
Query: 308 CGNC-TLIRSA*LAQLVYICWVDFGYSKFQLRYLL 207
CG C + L YI + DF Y+ F RYLL
Sbjct: 86 CGKCLSFYDIIYLVSPSYITYTDFNYTSFLKRYLL 120
>08_02_0124 - 12823791-12824213
Length = 140
Score = 27.1 bits (57), Expect = 7.9
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +2
Query: 269 GQAKHYESAYSYHKEWEKHDT 331
G+A E SY EWEK+DT
Sbjct: 33 GRAAKVEDGDSYGSEWEKNDT 53
>08_01_0409 +
3625071-3625228,3625829-3625905,3626310-3626889,
3626974-3627111,3627318-3627387,3627449-3627933,
3628681-3628890,3629259-3629326,3629855-3629961,
3630275-3630346,3630448-3630614,3630709-3630820,
3631464-3631650,3632174-3632286
Length = 847
Score = 27.1 bits (57), Expect = 7.9
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +2
Query: 230 LNNQNQPNIYKPTGQAKHYESAYSYHKEWEKHDTKPTENPLPKNSE 367
+N Q PN+ + K + +SY W+K D P E + K S+
Sbjct: 185 INVQTDPNVAVDITEDKEVQVEFSYSVTWKKTDI-PFEKRMEKYSK 229
>02_04_0614 -
24400284-24400568,24400669-24400932,24401040-24401134,
24401173-24401253,24401544-24402066
Length = 415
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 5/52 (9%)
Frame = +2
Query: 242 NQPNIYKPTGQAKHYESAYSYH-----KEWEKHDTKPTENPLPKNSELYEDS 382
N NI+ G YE Y+ + WEK + + P+P SE +E S
Sbjct: 104 NGRNIFMKYGDGFRYEDGNPYYAADREETWEKQILRQMKFPIPDLSESWEGS 155
>02_04_0545 + 23778769-23779245,23779395-23779688
Length = 256
Score = 27.1 bits (57), Expect = 7.9
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -2
Query: 447 LKCEFCESIAVESYCCPDKCA 385
++C+ CES A CC D+ A
Sbjct: 3 IQCDACESAAAAVVCCADEAA 23
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,773,120
Number of Sequences: 37544
Number of extensions: 186962
Number of successful extensions: 536
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 536
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 987904180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -