Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_O06
         (561 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF022985-11|AAB69967.2|  650|Caenorhabditis elegans Hypothetical...    32   0.32 
AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical...    29   3.0  
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e...    29   3.0  
AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical ...    28   5.3  
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical...    27   7.0  
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ...    27   7.0  
AF099919-4|AAC68791.1|  230|Caenorhabditis elegans Hypothetical ...    27   7.0  
AC024804-8|AAF60745.1|  319|Caenorhabditis elegans Hypothetical ...    27   7.0  
Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AC024804-7|AAF60744.1|  322|Caenorhabditis elegans Hypothetical ...    27   9.2  

>AF022985-11|AAB69967.2|  650|Caenorhabditis elegans Hypothetical
           protein T15B7.14 protein.
          Length = 650

 Score = 31.9 bits (69), Expect = 0.32
 Identities = 16/37 (43%), Positives = 21/37 (56%)
 Frame = +3

Query: 441 ILQLSSAMILMDSFYQLLMKFIPQFFVNMDTLLKIYR 551
           +  L S  I+  SFY LL  F P  F+++  LL IYR
Sbjct: 326 LFTLPSPYIVSTSFYILLCLFAPSCFISLLALLAIYR 362


>AL132865-13|CAB60609.1|  496|Caenorhabditis elegans Hypothetical
           protein Y62E10A.16 protein.
          Length = 496

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +3

Query: 327 RLLLFSTCSTMLKTLKPSTRVPLSLV 404
           R+  F TCS  +KT+K    +PLS+V
Sbjct: 290 RIEQFLTCSETIKTVKSDALIPLSIV 315


>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
            mutant phenotypeprotein 1 protein.
          Length = 4177

 Score = 28.7 bits (61), Expect = 3.0
 Identities = 10/29 (34%), Positives = 20/29 (68%)
 Frame = +3

Query: 123  EKGLSLFQDVDQVNVDDEYYKIGKDYDVE 209
            E G S+  DV ++++DD+Y+ +G  +D +
Sbjct: 2538 EDGDSMEDDVQRLDLDDDYFDMGGPFDAQ 2566


>AF047657-7|AAK18943.1|  424|Caenorhabditis elegans Hypothetical
           protein F37B4.7 protein.
          Length = 424

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 22/50 (44%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +2

Query: 302 IFYQKLREEAIALFHLFYYAKDFETFYKSA-AFARVHLNEGQFLYAYYIA 448
           +FY       IA F  + Y K  +T YKSA AF R  L  G+FL AY +A
Sbjct: 101 VFYGWATATEIAYF-AYIYVKVPKTEYKSATAFTRAALLVGRFL-AYALA 148


>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 426 SCTHIILQLSSAMILMDSFYQLLMKFIPQFFVNMDTLLKI 545
           SCTH +L +S  M+L   F   ++ F   FF  +  + K+
Sbjct: 5   SCTHHLLPVSKLMVLCKFFCVDILNFTSIFFRELGEIEKL 44


>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
           protein Y64G10A.7 protein.
          Length = 1651

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/40 (32%), Positives = 21/40 (52%)
 Frame = +3

Query: 426 SCTHIILQLSSAMILMDSFYQLLMKFIPQFFVNMDTLLKI 545
           SCTH +L +S  M+L   F   ++ F   FF  +  + K+
Sbjct: 5   SCTHHLLPVSKLMVLCKFFCVDILNFTSIFFRELGEIEKL 44


>AF099919-4|AAC68791.1|  230|Caenorhabditis elegans Hypothetical
          protein F40G9.12 protein.
          Length = 230

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 3  NYEDCPSSSGAHCPRAIQCGVT 68
          NYE    +SG HCPR + CG T
Sbjct: 25 NYE----TSGDHCPRVLSCGHT 42


>AC024804-8|AAF60745.1|  319|Caenorhabditis elegans Hypothetical
          protein Y51H7BR.1 protein.
          Length = 319

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +1

Query: 1  QTMKTVLVLAGLIALVQSSVVSPKTYHF 84
          +T+K V++  G I L+ +S++S KT HF
Sbjct: 12 KTLKNVILQMGHIELICTSLLSNKTKHF 39


>Z54236-7|CAA90982.1| 1471|Caenorhabditis elegans Hypothetical
           protein C27B7.7 protein.
          Length = 1471

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/52 (23%), Positives = 28/52 (53%)
 Frame = +3

Query: 366 TLKPSTRVPLSLVCT*MRDSSCTHIILQLSSAMILMDSFYQLLMKFIPQFFV 521
           T  P T  PLS+ CT ++  S   ++ +++   + +DS +  ++  + + F+
Sbjct: 256 TADPQTNEPLSITCT-VKSVSKASVLWKVNGIKVSVDSSFYTVVTSVHEDFI 306


>AC024804-7|AAF60744.1|  322|Caenorhabditis elegans Hypothetical
          protein Y51H7BR.2 protein.
          Length = 322

 Score = 27.1 bits (57), Expect = 9.2
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +1

Query: 1  QTMKTVLVLAGLIALVQSSVVSPKTYHF 84
          +T+K V++  G I L+ +S++S KT HF
Sbjct: 12 KTLKNVILHMGHIELICASLLSNKTKHF 39


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,081,724
Number of Sequences: 27780
Number of extensions: 233959
Number of successful extensions: 552
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 552
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)