SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_O05
         (401 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK131302-1|BAD18470.1|  626|Homo sapiens protein ( Homo sapiens ...    45   1e-04
AK128824-1|BAC87625.1|  706|Homo sapiens protein ( Homo sapiens ...    30   2.5  
AB037748-1|BAA92565.2| 1804|Homo sapiens KIAA1327 protein protein.     30   3.3  
X01179-1|CAA25619.1| 2351|Homo sapiens protein ( Human mRNA for ...    29   7.7  
M88648-1|AAA52420.1| 2351|Homo sapiens coagulation factor VIII p...    29   7.7  
M14113-1|AAA52485.1| 2351|Homo sapiens F8C protein.                    29   7.7  
K01740-1|AAA52484.1| 2351|Homo sapiens F8C protein.                    29   7.7  
BX890586-1|CAI43241.1| 2351|Homo sapiens coagulation factor VIII...    29   7.7  
BX842564-3|CAI41666.1| 2351|Homo sapiens coagulation factor VIII...    29   7.7  
BX842559-7|CAI41672.1| 2351|Homo sapiens coagulation factor VIII...    29   7.7  
BX470111-13|CAI41660.1| 2351|Homo sapiens coagulation factor VII...    29   7.7  
BC117494-1|AAI17495.1|   98|Homo sapiens hypothetical LOC149837 ...    29   7.7  
AY769950-1|AAV85964.1| 2351|Homo sapiens coagulation factor VIII...    29   7.7  

>AK131302-1|BAD18470.1|  626|Homo sapiens protein ( Homo sapiens
           cDNA FLJ16275 fis, clone NT2RI2027157, moderately
           similar to Mouse SDR2 mRNA. ).
          Length = 626

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 32/101 (31%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
 Frame = +1

Query: 97  PTGAPPSACFDMIPGHAADVQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAGILL 276
           P G    +C  MIP H    Q+VP  + I  +  + + G  I+V +SG        G LL
Sbjct: 24  PNGKVTQSCHGMIPEHGHSPQSVPV-HDIYVSQMTFRPGDQIEVTLSG----HPFKGFLL 78

Query: 277 EARQGDKI----VGTWTVSPDDTFSQTLNCGE-PNNAVTHK 384
           EAR  + +    +G++T+  D   SQ L C +   +AV+H+
Sbjct: 79  EARNAEDLNGPPIGSFTLI-DSEVSQLLTCEDIQGSAVSHR 118


>AK128824-1|BAC87625.1|  706|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46160 fis, clone TESTI4002141. ).
          Length = 706

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -2

Query: 319 LRSKCRRSCHPDELPGGCRPFCLRVFC 239
           LR+     C P +  GGC   C+RV C
Sbjct: 241 LRASVSECCVPGDAQGGCAGICVRVLC 267


>AB037748-1|BAA92565.2| 1804|Homo sapiens KIAA1327 protein protein.
          Length = 1804

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 20/86 (23%), Positives = 35/86 (40%)
 Frame = +1

Query: 112 PSACFDMIPGHAADVQTVPAPYTITTAVSSVKAGHSIDVVISGKTPEDKMAGILLEARQG 291
           P  C   +   A+D           T +S+   G S DV++SG+ PE ++A      ++ 
Sbjct: 725 PGGCEGPMTSAASDQSDSQLEKVEDTTISTGLVGGSYDVLVSGEVPECEVAHTSPSEKED 784

Query: 292 DKIVGTWTVSPDDTFSQTLNCGEPNN 369
           + I+ +      D    T   G+  N
Sbjct: 785 EDIITSVENEECDGLMATTASGDITN 810


>X01179-1|CAA25619.1| 2351|Homo sapiens protein ( Human mRNA for
           factor VIII. ).
          Length = 2351

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 291 TLTSFQEDAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRWY 163
           T+    E+ G ++ GC  +D    GMT+  +  SC      +Y
Sbjct: 696 TVFMSMENPGLWILGCHNSDFRNRGMTALLKVSSCDKNTGDYY 738


>M88648-1|AAA52420.1| 2351|Homo sapiens coagulation factor VIII
           protein.
          Length = 2351

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 291 TLTSFQEDAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRWY 163
           T+    E+ G ++ GC  +D    GMT+  +  SC      +Y
Sbjct: 696 TVFMSMENPGLWILGCHNSDFRNRGMTALLKVSSCDKNTGDYY 738


>M14113-1|AAA52485.1| 2351|Homo sapiens F8C protein.
          Length = 2351

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 291 TLTSFQEDAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRWY 163
           T+    E+ G ++ GC  +D    GMT+  +  SC      +Y
Sbjct: 696 TVFMSMENPGLWILGCHNSDFRNRGMTALLKVSSCDKNTGDYY 738


>K01740-1|AAA52484.1| 2351|Homo sapiens F8C protein.
          Length = 2351

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 291 TLTSFQEDAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRWY 163
           T+    E+ G ++ GC  +D    GMT+  +  SC      +Y
Sbjct: 696 TVFMSMENPGLWILGCHNSDFRNRGMTALLKVSSCDKNTGDYY 738


>BX890586-1|CAI43241.1| 2351|Homo sapiens coagulation factor VIII,
           procoagulant component (hemophilia A) protein.
          Length = 2351

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 291 TLTSFQEDAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRWY 163
           T+    E+ G ++ GC  +D    GMT+  +  SC      +Y
Sbjct: 696 TVFMSMENPGLWILGCHNSDFRNRGMTALLKVSSCDKNTGDYY 738


>BX842564-3|CAI41666.1| 2351|Homo sapiens coagulation factor VIII,
           procoagulant component (hemophilia A) protein.
          Length = 2351

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 291 TLTSFQEDAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRWY 163
           T+    E+ G ++ GC  +D    GMT+  +  SC      +Y
Sbjct: 696 TVFMSMENPGLWILGCHNSDFRNRGMTALLKVSSCDKNTGDYY 738


>BX842559-7|CAI41672.1| 2351|Homo sapiens coagulation factor VIII,
           procoagulant component (hemophilia A) protein.
          Length = 2351

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 291 TLTSFQEDAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRWY 163
           T+    E+ G ++ GC  +D    GMT+  +  SC      +Y
Sbjct: 696 TVFMSMENPGLWILGCHNSDFRNRGMTALLKVSSCDKNTGDYY 738


>BX470111-13|CAI41660.1| 2351|Homo sapiens coagulation factor VIII,
           procoagulant component (hemophilia A) protein.
          Length = 2351

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 291 TLTSFQEDAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRWY 163
           T+    E+ G ++ GC  +D    GMT+  +  SC      +Y
Sbjct: 696 TVFMSMENPGLWILGCHNSDFRNRGMTALLKVSSCDKNTGDYY 738


>BC117494-1|AAI17495.1|   98|Homo sapiens hypothetical LOC149837
           protein.
          Length = 98

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 15/42 (35%), Positives = 19/42 (45%)
 Frame = +2

Query: 191 LSAR*KLVIPLTWLSAAKHPKTKWPASSWKLVRVTRSSALGP 316
           LSA   L +PL WL+     KT  P SS   +   +   L P
Sbjct: 9   LSAHHLLPLPLQWLTLETKTKTPQPFSSTSQISTDKDKGLNP 50


>AY769950-1|AAV85964.1| 2351|Homo sapiens coagulation factor VIII,
           procoagulant component (hemophilia A) protein.
          Length = 2351

 Score = 28.7 bits (61), Expect = 7.7
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 291 TLTSFQEDAGHFVFGCFAADNHVNGMTSFYRADSCSDGVRRWY 163
           T+    E+ G ++ GC  +D    GMT+  +  SC      +Y
Sbjct: 696 TVFMSMENPGLWILGCHNSDFRNRGMTALLKVSSCDKNTGDYY 738


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,979,558
Number of Sequences: 237096
Number of extensions: 1592429
Number of successful extensions: 4243
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4243
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -