Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_O04
(489 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC069622-1|AAH69622.1| 661|Homo sapiens solute carrier family 2... 31 2.8
AL158206-3|CAH73021.1| 644|Homo sapiens solute carrier family 2... 31 2.8
AL158206-2|CAH73020.1| 661|Homo sapiens solute carrier family 2... 31 2.8
AL158077-2|CAH74109.1| 644|Homo sapiens solute carrier family 2... 31 2.8
AL158077-1|CAH74108.1| 661|Homo sapiens solute carrier family 2... 31 2.8
AL133281-2|CAH71737.1| 644|Homo sapiens solute carrier family 2... 31 2.8
AL133281-1|CAH71736.1| 661|Homo sapiens solute carrier family 2... 31 2.8
AF177987-1|AAF25811.1| 644|Homo sapiens cone sodium-calcium pot... 31 2.8
AF097366-1|AAF21810.1| 661|Homo sapiens cone sodium-calcium pot... 31 2.8
BC032345-1|AAH32345.1| 337|Homo sapiens GTPase, IMAP family mem... 30 4.9
BC013934-1|AAH13934.1| 337|Homo sapiens GTPase, IMAP family mem... 30 4.9
>BC069622-1|AAH69622.1| 661|Homo sapiens solute carrier family 24
(sodium/potassium/calcium exchanger), member 2 protein.
Length = 661
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = -2
Query: 320 LFNCIKNICKCVITS----SIRYDSLFKR*QLTLGAVILLTFIYLRDVIILF-SLLLFCN 156
+FN + I C + S ++ + LF+ + +I+L +L +VI+ + SLLL
Sbjct: 213 VFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFLDNVIMWWESLLLLTA 272
Query: 155 YFCLILFRIPDVKYNVYV 102
YFC ++F +K+NV V
Sbjct: 273 YFCYVVF----MKFNVQV 286
>AL158206-3|CAH73021.1| 644|Homo sapiens solute carrier family 24
(sodium/potassium/calcium exchanger), member 2 protein.
Length = 644
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = -2
Query: 320 LFNCIKNICKCVITS----SIRYDSLFKR*QLTLGAVILLTFIYLRDVIILF-SLLLFCN 156
+FN + I C + S ++ + LF+ + +I+L +L +VI+ + SLLL
Sbjct: 213 VFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFLDNVIMWWESLLLLTA 272
Query: 155 YFCLILFRIPDVKYNVYV 102
YFC ++F +K+NV V
Sbjct: 273 YFCYVVF----MKFNVQV 286
>AL158206-2|CAH73020.1| 661|Homo sapiens solute carrier family 24
(sodium/potassium/calcium exchanger), member 2 protein.
Length = 661
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = -2
Query: 320 LFNCIKNICKCVITS----SIRYDSLFKR*QLTLGAVILLTFIYLRDVIILF-SLLLFCN 156
+FN + I C + S ++ + LF+ + +I+L +L +VI+ + SLLL
Sbjct: 213 VFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFLDNVIMWWESLLLLTA 272
Query: 155 YFCLILFRIPDVKYNVYV 102
YFC ++F +K+NV V
Sbjct: 273 YFCYVVF----MKFNVQV 286
>AL158077-2|CAH74109.1| 644|Homo sapiens solute carrier family 24
(sodium/potassium/calcium exchanger), member 2 protein.
Length = 644
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = -2
Query: 320 LFNCIKNICKCVITS----SIRYDSLFKR*QLTLGAVILLTFIYLRDVIILF-SLLLFCN 156
+FN + I C + S ++ + LF+ + +I+L +L +VI+ + SLLL
Sbjct: 213 VFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFLDNVIMWWESLLLLTA 272
Query: 155 YFCLILFRIPDVKYNVYV 102
YFC ++F +K+NV V
Sbjct: 273 YFCYVVF----MKFNVQV 286
>AL158077-1|CAH74108.1| 661|Homo sapiens solute carrier family 24
(sodium/potassium/calcium exchanger), member 2 protein.
Length = 661
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = -2
Query: 320 LFNCIKNICKCVITS----SIRYDSLFKR*QLTLGAVILLTFIYLRDVIILF-SLLLFCN 156
+FN + I C + S ++ + LF+ + +I+L +L +VI+ + SLLL
Sbjct: 213 VFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFLDNVIMWWESLLLLTA 272
Query: 155 YFCLILFRIPDVKYNVYV 102
YFC ++F +K+NV V
Sbjct: 273 YFCYVVF----MKFNVQV 286
>AL133281-2|CAH71737.1| 644|Homo sapiens solute carrier family 24
(sodium/potassium/calcium exchanger), member 2 protein.
Length = 644
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = -2
Query: 320 LFNCIKNICKCVITS----SIRYDSLFKR*QLTLGAVILLTFIYLRDVIILF-SLLLFCN 156
+FN + I C + S ++ + LF+ + +I+L +L +VI+ + SLLL
Sbjct: 213 VFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFLDNVIMWWESLLLLTA 272
Query: 155 YFCLILFRIPDVKYNVYV 102
YFC ++F +K+NV V
Sbjct: 273 YFCYVVF----MKFNVQV 286
>AL133281-1|CAH71736.1| 661|Homo sapiens solute carrier family 24
(sodium/potassium/calcium exchanger), member 2 protein.
Length = 661
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = -2
Query: 320 LFNCIKNICKCVITS----SIRYDSLFKR*QLTLGAVILLTFIYLRDVIILF-SLLLFCN 156
+FN + I C + S ++ + LF+ + +I+L +L +VI+ + SLLL
Sbjct: 213 VFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFLDNVIMWWESLLLLTA 272
Query: 155 YFCLILFRIPDVKYNVYV 102
YFC ++F +K+NV V
Sbjct: 273 YFCYVVF----MKFNVQV 286
>AF177987-1|AAF25811.1| 644|Homo sapiens cone sodium-calcium
potassium exchanger splice variant protein.
Length = 644
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = -2
Query: 320 LFNCIKNICKCVITS----SIRYDSLFKR*QLTLGAVILLTFIYLRDVIILF-SLLLFCN 156
+FN + I C + S ++ + LF+ + +I+L +L +VI+ + SLLL
Sbjct: 213 VFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFLDNVIMWWESLLLLTA 272
Query: 155 YFCLILFRIPDVKYNVYV 102
YFC ++F +K+NV V
Sbjct: 273 YFCYVVF----MKFNVQV 286
>AF097366-1|AAF21810.1| 661|Homo sapiens cone sodium-calcium
potassium exchanger protein.
Length = 661
Score = 30.7 bits (66), Expect = 2.8
Identities = 24/78 (30%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = -2
Query: 320 LFNCIKNICKCVITS----SIRYDSLFKR*QLTLGAVILLTFIYLRDVIILF-SLLLFCN 156
+FN + I C + S ++ + LF+ + +I+L +L +VI+ + SLLL
Sbjct: 213 VFNILFVIGMCALFSREILNLTWWPLFRDVSFYIVDLIMLIIFFLDNVIMWWESLLLLTA 272
Query: 155 YFCLILFRIPDVKYNVYV 102
YFC ++F +K+NV V
Sbjct: 273 YFCYVVF----MKFNVQV 286
>BC032345-1|AAH32345.1| 337|Homo sapiens GTPase, IMAP family member
2 protein.
Length = 337
Score = 29.9 bits (64), Expect = 4.9
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -2
Query: 224 VILLTFIYLRDVIILFSLLLF--CNYFCLILFRIP 126
+I+L L + LF LLF CN FC +LF IP
Sbjct: 283 LIILWLCILHSMCNLFCCLLFSMCNLFCSLLFIIP 317
>BC013934-1|AAH13934.1| 337|Homo sapiens GTPase, IMAP family member
2 protein.
Length = 337
Score = 29.9 bits (64), Expect = 4.9
Identities = 16/35 (45%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Frame = -2
Query: 224 VILLTFIYLRDVIILFSLLLF--CNYFCLILFRIP 126
+I+L L + LF LLF CN FC +LF IP
Sbjct: 283 LIILWLCILHSMCNLFCCLLFSMCNLFCSLLFIIP 317
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,550,231
Number of Sequences: 237096
Number of extensions: 822457
Number of successful extensions: 921
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 919
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -