Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_O02
         (576 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    26   1.0  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    25   1.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   7.1  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   9.4  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 25.8 bits (54), Expect = 1.0
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 571  TAIYRSLVIVKWKTLVYKVYY*CFWVYL 488
            T I+   +++KW  L +KVY+   W +L
Sbjct: 1347 TVIFFLEMLIKWLALGFKVYFTNAWCWL 1374


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 25.0 bits (52), Expect = 1.8
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = +3

Query: 267 RFQSSQLSTQAIRQPSRPWWEVNVS*R*AILKLGEMMINL 386
           R  + Q+ T A   P RP+W V +    A  KL    ++L
Sbjct: 29  RIWNIQMETPADHNPERPFWVVGLQNDEAARKLASRSMSL 68


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +1

Query: 493  RPKSINNTLYILTFSTLQ*RVTCI 564
            RP  I+++LY  TF  L  RV CI
Sbjct: 2832 RPSKISSSLYQATFLAL--RVLCI 2853


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +3

Query: 306 QPSRPWWEV 332
           +P RPWW V
Sbjct: 78  RPGRPWWSV 86


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,539
Number of Sequences: 2352
Number of extensions: 11997
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)