Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_N23
         (383 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    47   5e-06
AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like ...    35   0.017
U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    34   0.039
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    32   0.12 
U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like pr...    31   0.28 
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    29   0.85 
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    29   1.5  
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    28   2.6  
U39993-2|AAK72059.1|  744|Caenorhabditis elegans Hypothetical pr...    27   4.5  

>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 46.8 bits (106), Expect = 5e-06
 Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 15/77 (19%)
 Frame = +3

Query: 156 NITVNIN--DDDSCGVEAS-TSLI------------HHNPWLVLLEYYRRGRKTEIRCGA 290
           N+ +N N  DD+ CG +++ TS +            H  PW V +    R    E+ CG 
Sbjct: 5   NVDINSNNLDDELCGRQSTYTSFMLTDAAGNTGNPTHLAPWAVQIRVKARKGDFEVICGG 64

Query: 291 TLISSKHVITAAHCVKK 341
           TLI+ KHV+TAAHC +K
Sbjct: 65  TLITLKHVLTAAHCFQK 81


>AF003134-1|AAB54144.1|  522|Caenorhabditis elegans Trypsin-like
           protease protein 7 protein.
          Length = 522

 Score = 35.1 bits (77), Expect = 0.017
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +3

Query: 228 PWLVLLEYYRRGRKTEIRCGATLISSKHVITAAHC 332
           PW V    Y +  ++   C  T++S +H++ A HC
Sbjct: 175 PWSVFTYLYSKDEQSATTCTGTIVSPRHILIATHC 209


>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 33.9 bits (74), Expect = 0.039
 Identities = 20/49 (40%), Positives = 23/49 (46%)
 Frame = +3

Query: 195 VEASTSLIHHNPWLVLLEYYRRGRKTEIRCGATLISSKHVITAAHCVKK 341
           +  S S  H  PW V L      R    RCG +LI    V+TAAHC  K
Sbjct: 59  IGGSESSPHSWPWTVQL----LSRLGHHRCGGSLIDPNFVLTAAHCFAK 103


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 32.3 bits (70), Expect = 0.12
 Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +3

Query: 228 PWLVLLEYYRRGRKTEIR-CGATLISSKHVITAAHCVKK 341
           PW   L    R + T+   CGA+++   H+ITAAHC ++
Sbjct: 39  PWTAAL----RNKATKAHHCGASILDKTHLITAAHCFEE 73


>U97408-1|AAB93344.2|  360|Caenorhabditis elegans Trypsin-like
           protease protein 6 protein.
          Length = 360

 Score = 31.1 bits (67), Expect = 0.28
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 4/43 (9%)
 Frame = +3

Query: 216 IHHNPWLVLLEYYRRGRKTEI----RCGATLISSKHVITAAHC 332
           I   PW V +  Y   +  +      C  TL S +H++TA HC
Sbjct: 49  IDEAPWAVRINTYTNVKNIDETWSKHCSGTLTSPRHILTATHC 91


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 19/49 (38%), Positives = 27/49 (55%)
 Frame = +3

Query: 183 DSCGVEASTSLIHHNPWLVLLEYYRRGRKTEIRCGATLISSKHVITAAH 329
           +SCG++   S I + PW V   +   G     R G ++IS  H+ITAAH
Sbjct: 15  ESCGIQQE-SKIKNFPWAV--SFTVDGVN---RLGGSIISPYHIITAAH 57


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 28.7 bits (61), Expect = 1.5
 Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 231 WLV-LLEYYRRGRKTEIRCGATLISSKHVITAAHC 332
           W+  L+ Y   G+   I CGAT+I    ++TAAHC
Sbjct: 50  WMAKLVSYGDNGQG--ILCGATVIDDFWLVTAAHC 82


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 27.9 bits (59), Expect = 2.6
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = +3

Query: 282 CGATLISSKHVITAAHCV 335
           CG  LI+   VIT+AHCV
Sbjct: 46  CGGVLIAPSIVITSAHCV 63


>U39993-2|AAK72059.1|  744|Caenorhabditis elegans Hypothetical
           protein F47E1.2 protein.
          Length = 744

 Score = 27.1 bits (57), Expect = 4.5
 Identities = 14/29 (48%), Positives = 21/29 (72%)
 Frame = +1

Query: 244 LNTTDVGAKLKSDAGRR*LARSMSSRQLI 330
           +NTT+V AKLK  AG+  LA + + +QL+
Sbjct: 102 INTTEVSAKLKPTAGQ--LASNSTLKQLL 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,558,660
Number of Sequences: 27780
Number of extensions: 131918
Number of successful extensions: 315
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 315
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)