Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_N21
(501 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical pr... 205 2e-53
X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein. 205 2e-53
Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical pr... 204 2e-53
Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical pr... 204 2e-53
X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein. 204 2e-53
X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein. 204 2e-53
X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein. 204 2e-53
U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4... 204 2e-53
U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4... 204 2e-53
U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4... 204 2e-53
Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical pr... 194 3e-50
AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical... 136 6e-33
Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical pr... 130 6e-31
AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 comple... 89 2e-18
AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical ... 63 1e-10
J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein ( C.ele... 62 2e-10
J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein ( C.ele... 62 2e-10
J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein ( C.ele... 62 2e-10
J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein ( C.ele... 57 8e-09
U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical pr... 49 2e-06
Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical pr... 38 0.004
U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related p... 38 0.004
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 32 0.20
AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical ... 30 1.1
AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical... 30 1.1
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 28 4.4
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 28 4.4
AL110485-20|CAB60368.2| 600|Caenorhabditis elegans Hypothetical... 27 5.8
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 27 5.8
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 27 7.6
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 27 7.6
>Z81584-5|CAB04675.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.5 protein.
Length = 376
Score = 205 bits (500), Expect = 2e-53
Identities = 99/116 (85%), Positives = 103/116 (88%)
Frame = +2
Query: 152 PSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 331
P PK + ++ FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEG 169
Query: 332 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALDFE 499
YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 170 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Score = 153 bits (370), Expect = 9e-38
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 180
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 181 MTQIMFET 204
MTQIMFET
Sbjct: 120 MTQIMFET 127
>X16797-1|CAA34718.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 205 bits (500), Expect = 2e-53
Identities = 99/116 (85%), Positives = 103/116 (88%)
Frame = +2
Query: 152 PSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 331
P PK + ++ FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEG 169
Query: 332 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALDFE 499
YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 170 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Score = 153 bits (370), Expect = 9e-38
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 180
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 181 MTQIMFET 204
MTQIMFET
Sbjct: 120 MTQIMFET 127
>Z81584-6|CAB04678.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.6 protein.
Length = 376
Score = 204 bits (499), Expect = 2e-53
Identities = 98/116 (84%), Positives = 103/116 (88%)
Frame = +2
Query: 152 PSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 331
P PK + ++ FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEG 169
Query: 332 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALDFE 499
YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 170 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Score = 153 bits (370), Expect = 9e-38
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 180
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 181 MTQIMFET 204
MTQIMFET
Sbjct: 120 MTQIMFET 127
>Z81584-4|CAB04676.1| 376|Caenorhabditis elegans Hypothetical
protein T04C12.4 protein.
Length = 376
Score = 204 bits (499), Expect = 2e-53
Identities = 98/116 (84%), Positives = 103/116 (88%)
Frame = +2
Query: 152 PSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 331
P PK + ++ FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEG 169
Query: 332 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALDFE 499
YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 170 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Score = 153 bits (370), Expect = 9e-38
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 180
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 181 MTQIMFET 204
MTQIMFET
Sbjct: 120 MTQIMFET 127
>X16799-1|CAA34720.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 204 bits (499), Expect = 2e-53
Identities = 98/116 (84%), Positives = 103/116 (88%)
Frame = +2
Query: 152 PSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 331
P PK + ++ FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEG 169
Query: 332 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALDFE 499
YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 170 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Score = 153 bits (370), Expect = 9e-38
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 180
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 181 MTQIMFET 204
MTQIMFET
Sbjct: 120 MTQIMFET 127
>X16798-1|CAA34719.1| 375|Caenorhabditis elegans actin protein.
Length = 375
Score = 204 bits (499), Expect = 2e-53
Identities = 98/116 (84%), Positives = 103/116 (88%)
Frame = +2
Query: 152 PSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 331
P PK + ++ FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEG 169
Query: 332 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALDFE 499
YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 170 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Score = 153 bits (370), Expect = 9e-38
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 180
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 181 MTQIMFET 204
MTQIMFET
Sbjct: 120 MTQIMFET 127
>X16796-1|CAA34717.1| 376|Caenorhabditis elegans actin protein.
Length = 376
Score = 204 bits (499), Expect = 2e-53
Identities = 98/116 (84%), Positives = 103/116 (88%)
Frame = +2
Query: 152 PSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 331
P PK + ++ FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEG 169
Query: 332 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALDFE 499
YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 170 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Score = 153 bits (370), Expect = 9e-38
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 180
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 181 MTQIMFET 204
MTQIMFET
Sbjct: 120 MTQIMFET 127
>U64601-7|AAK77622.1| 332|Caenorhabditis elegans Actin protein 4,
isoform b protein.
Length = 332
Score = 204 bits (499), Expect = 2e-53
Identities = 98/116 (84%), Positives = 103/116 (88%)
Frame = +2
Query: 152 PSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 331
P PK + ++ FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEG
Sbjct: 66 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEG 125
Query: 332 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALDFE 499
YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 126 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 181
Score = 153 bits (370), Expect = 9e-38
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 180
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 16 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 75
Query: 181 MTQIMFET 204
MTQIMFET
Sbjct: 76 MTQIMFET 83
>U64601-6|AAT92068.1| 362|Caenorhabditis elegans Actin protein 4,
isoform c protein.
Length = 362
Score = 204 bits (499), Expect = 2e-53
Identities = 98/116 (84%), Positives = 103/116 (88%)
Frame = +2
Query: 152 PSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 331
P PK + ++ FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEG
Sbjct: 96 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEG 155
Query: 332 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALDFE 499
YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 156 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 211
Score = 153 bits (370), Expect = 9e-38
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 180
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 46 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 105
Query: 181 MTQIMFET 204
MTQIMFET
Sbjct: 106 MTQIMFET 113
>U64601-5|AAB04575.1| 376|Caenorhabditis elegans Actin protein 4,
isoform a protein.
Length = 376
Score = 204 bits (499), Expect = 2e-53
Identities = 98/116 (84%), Positives = 103/116 (88%)
Frame = +2
Query: 152 PSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 331
P PK + ++ FNTPAMYVAIQAVLSLYASGRTTG+VLDSGDGV+HTVPIYEG
Sbjct: 110 PLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEG 169
Query: 332 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALDFE 499
YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDI EKLCYVALDFE
Sbjct: 170 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFE 225
Score = 153 bits (370), Expect = 9e-38
Identities = 68/68 (100%), Positives = 68/68 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 180
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119
Query: 181 MTQIMFET 204
MTQIMFET
Sbjct: 120 MTQIMFET 127
>Z83241-1|CAB05817.1| 375|Caenorhabditis elegans Hypothetical
protein T25C8.2 protein.
Length = 375
Score = 194 bits (473), Expect = 3e-50
Identities = 93/116 (80%), Positives = 100/116 (86%)
Frame = +2
Query: 152 PSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 331
P PK + ++ FNTPAMYV IQAVLSLYASGRTTGIVLD+GDGV+HTVPIYEG
Sbjct: 109 PLNPKSNREKMTQIMFETFNTPAMYVNIQAVLSLYASGRTTGIVLDTGDGVTHTVPIYEG 168
Query: 332 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALDFE 499
YALPHAI RLDLAGRDLTDY+MKILTERGY+FTTTAEREIVRDI EKLCYVA DFE
Sbjct: 169 YALPHAIQRLDLAGRDLTDYMMKILTERGYTFTTTAEREIVRDIKEKLCYVAHDFE 224
Score = 151 bits (366), Expect = 3e-37
Identities = 66/68 (97%), Positives = 68/68 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 180
QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPK+NREK
Sbjct: 59 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKSNREK 118
Query: 181 MTQIMFET 204
MTQIMFET
Sbjct: 119 MTQIMFET 126
>AL132949-19|CAB70110.2| 374|Caenorhabditis elegans Hypothetical
protein Y53F4B.22 protein.
Length = 374
Score = 136 bits (330), Expect = 6e-33
Identities = 63/114 (55%), Positives = 81/114 (71%)
Frame = +2
Query: 152 PSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG 331
P P R + FN PA+Y+ +QAVLSLYA+GRTTG+VLDSGDGV+H VPI +G
Sbjct: 113 PLNPLKNRERSAEIFFETFNVPALYIQMQAVLSLYATGRTTGVVLDSGDGVTHAVPIVKG 172
Query: 332 YALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALD 493
+A+ HAI R+DLAGRD+T+YL +L GY F + E EIVR++ E CY+ALD
Sbjct: 173 FAMKHAIQRMDLAGRDVTEYLRVLLRREGYEFHRSNEFEIVREMKENACYLALD 226
Score = 99 bits (238), Expect = 9e-22
Identities = 41/69 (59%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANRE 177
+S RG+ +++YP+EHGIV NW DMEKIW + F ++L++ PEEHPVLLT+APLNP NRE
Sbjct: 62 ESNRGLFSIEYPMEHGIVNNWSDMEKIWEYIFGQDQLKIFPEEHPVLLTDAPLNPLKNRE 121
Query: 178 KMTQIMFET 204
+ +I FET
Sbjct: 122 RSAEIFFET 130
>Z71181-1|CAA94894.1| 395|Caenorhabditis elegans Hypothetical
protein K07C5.1 protein.
Length = 395
Score = 130 bits (314), Expect = 6e-31
Identities = 59/127 (46%), Positives = 85/127 (66%)
Frame = +2
Query: 119 PRSTQSCSPKLPSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGD 298
P+ + + P P + ++ + ++YVA+QAVL+LYA G TG+V+DSGD
Sbjct: 102 PKECKLLLTEPPLNPNSNREKMFQVMFEQYGFNSIYVAVQAVLTLYAQGLLTGVVVDSGD 161
Query: 299 GVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLC 478
GV+H P+YEG+AL H RLD+AGRD+T YL+K+L +RGY+F +A+ E VR + EKLC
Sbjct: 162 GVTHICPVYEGFALHHLTRRLDIAGRDITKYLIKLLLQRGYNFNHSADFETVRQMKEKLC 221
Query: 479 YVALDFE 499
Y+A D E
Sbjct: 222 YIAYDVE 228
Score = 83.0 bits (196), Expect = 1e-16
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Frame = +1
Query: 10 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNE-LRVAPEEHPVLLTEAPLNPKANREKMT 186
R +L + YP+++GIV NWDDM +W HTF E L + P+E +LLTE PLNP +NREKM
Sbjct: 65 RQMLDINYPMDNGIVRNWDDMAHVWDHTFGPEKLDIDPKECKLLLTEPPLNPNSNREKMF 124
Query: 187 QIMFE 201
Q+MFE
Sbjct: 125 QVMFE 129
>AC024200-9|AAF36012.1| 425|Caenorhabditis elegans Arp2/3 complex
component protein 1 protein.
Length = 425
Score = 88.6 bits (210), Expect = 2e-18
Identities = 41/104 (39%), Positives = 64/104 (61%), Gaps = 8/104 (7%)
Frame = +2
Query: 206 FNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRL 361
FN P +Y+A+QAVL+L AS + TG+V+DSGDGV+H +P+ +GY + I +
Sbjct: 141 FNVPGLYIAVQAVLALTASWNSREANERSLTGLVIDSGDGVTHCIPVADGYVIGSCIKHI 200
Query: 362 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIXEKLCYVALD 493
+AGRD+T ++ +L +R ++ E+ + I EK CYV D
Sbjct: 201 PIAGRDITYFIQSLLRDREHTIPAEQSYEVAKMIKEKFCYVCPD 244
Score = 75.8 bits (178), Expect = 2e-14
Identities = 33/61 (54%), Positives = 40/61 (65%)
Frame = +1
Query: 22 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 201
T+KYPI HGIV +WD ME+ W + LR PE+H LLTE PLN NRE +IMFE
Sbjct: 80 TVKYPIRHGIVEDWDLMERYWEQCIFKYLRAEPEDHFFLLTEPPLNTPENREYTAEIMFE 139
Query: 202 T 204
+
Sbjct: 140 S 140
>AC006833-3|AAF60947.2| 436|Caenorhabditis elegans Hypothetical
protein ZK616.4 protein.
Length = 436
Score = 63.3 bits (147), Expect = 1e-10
Identities = 26/70 (37%), Positives = 47/70 (67%)
Frame = +2
Query: 206 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 385
F PA Y++ VLS +A GRT G+++DSG + VP+++GYA+ HA+++ + G +T
Sbjct: 150 FQVPAYYLSKNVVLSCFAQGRTHGLMVDSGATQTSVVPVFDGYAVTHAVVKCPIGGDLIT 209
Query: 386 DYLMKILTER 415
+ L ++L ++
Sbjct: 210 EQLAQMLDQQ 219
Score = 60.9 bits (141), Expect = 5e-10
Identities = 26/58 (44%), Positives = 39/58 (67%)
Frame = +1
Query: 37 IEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETVQ 210
++ G++ +W+ EKI H++ N L P EHPVL +E+ N +A REK+T+IMFE Q
Sbjct: 94 MKEGLIEDWELFEKIVEHSYENILYSNPSEHPVLFSESSWNDRARREKLTEIMFEKFQ 151
>J01046-1|AAA27890.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene IV, 5' end. ).
Length = 86
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKI 81
QSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01044-1|AAA27889.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene III, 5' end. ).
Length = 86
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKI 81
QSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01042-1|AAA27887.1| 86|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene I, 5' end. ).
Length = 86
Score = 62.5 bits (145), Expect = 2e-10
Identities = 27/27 (100%), Positives = 27/27 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDMEKI 81
QSKRGILTLKYPIEHGIVTNWDDMEKI
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDMEKI 86
>J01043-1|AAA27888.1| 83|Caenorhabditis elegans protein (
C.elegans (nematode)actin gene II, 5' end. ).
Length = 83
Score = 56.8 bits (131), Expect = 8e-09
Identities = 24/24 (100%), Positives = 24/24 (100%)
Frame = +1
Query: 1 QSKRGILTLKYPIEHGIVTNWDDM 72
QSKRGILTLKYPIEHGIVTNWDDM
Sbjct: 60 QSKRGILTLKYPIEHGIVTNWDDM 83
>U40799-8|AAA81487.1| 552|Caenorhabditis elegans Hypothetical
protein F42C5.9 protein.
Length = 552
Score = 48.8 bits (111), Expect = 2e-06
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Frame = +2
Query: 236 QAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTER 415
Q L LYA TTG+V+D G+ V + VP+ +GY + AI + + + D L L+
Sbjct: 310 QPSLILYAYDVTTGVVVDIGERV-NIVPVIDGYVVESAICSIPYGSQQMGDSLRASLSAH 368
Query: 416 G---YSFTTTAEREIVRDIXEKLCYVALDFE 499
Y+F + E+ I+R E+ YV D++
Sbjct: 369 NKGLYAFQSPVEKLILRFALEQTTYVPEDYQ 399
>Z46676-5|CAA86667.3| 418|Caenorhabditis elegans Hypothetical
protein C08B11.6 protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/74 (24%), Positives = 39/74 (52%)
Frame = +2
Query: 278 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 457
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 458 DIXEKLCYVALDFE 499
+ E LC+V+ +F+
Sbjct: 204 ECKEDLCFVSQNFD 217
Score = 35.5 bits (78), Expect = 0.022
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 34 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 201
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFD 116
>U24189-2|AAC47513.1| 418|Caenorhabditis elegans actin-related
protein-like protein.
Length = 418
Score = 37.9 bits (84), Expect = 0.004
Identities = 18/74 (24%), Positives = 39/74 (52%)
Frame = +2
Query: 278 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVR 457
+V+DSG + G + +++R+D+ G+ LT+ L ++ R + E ++
Sbjct: 146 VVVDSGFSWTTVASFVNGMLIQDSVIRIDVGGKALTNKLKDWVSYR--QLNVSEETYVIN 203
Query: 458 DIXEKLCYVALDFE 499
+ E LC+V+ +F+
Sbjct: 204 ECKEDLCFVSQNFD 217
Score = 35.5 bits (78), Expect = 0.022
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 34 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 201
PIE G V NWD ++IW TF + V + LT+ A + ++I+F+
Sbjct: 62 PIERGYVVNWDTQQQIWEKTF-GSMDVEASTSRIALTDNNYLIPALPDVSSEILFD 116
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 32.3 bits (70), Expect = 0.20
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = -1
Query: 303 TPSPESSTIPVVRPDAYSESTAWIATYMAGVL 208
TP P SST+PVV P ++ T +Y+A L
Sbjct: 865 TPQPLSSTMPVVAPSTSTQPTPTTGSYLANTL 896
>AL117203-2|CAB55104.1| 321|Caenorhabditis elegans Hypothetical
protein Y48C3A.3 protein.
Length = 321
Score = 29.9 bits (64), Expect = 1.1
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = +3
Query: 255 TRPVVPPVS-CWIPAMVYPTQYPSTRVTPYRTPSCV 359
TRP P++ W P +VY Q+P R+ P +P C+
Sbjct: 43 TRPRKSPLNENWKPDVVYLYQFPRARLLPNLSPFCM 78
>AF016448-12|AAB65959.1| 316|Caenorhabditis elegans Hypothetical
protein F41E6.11 protein.
Length = 316
Score = 29.9 bits (64), Expect = 1.1
Identities = 17/58 (29%), Positives = 23/58 (39%)
Frame = +3
Query: 201 DCSTHPPCT*LSRPCSHCTRPVVPPVSCWIPAMVYPTQYPSTRVTPYRTPSCVWT*PV 374
+C+T PPC P C P PP +P P P+ P P C+ P+
Sbjct: 23 NCAT-PPCP---EPMPVCATPPCPPQYAPLPPPPMPAPAPAYNPYPCANPPCIVVEPM 76
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 28.3 bits (60), Expect = 3.3
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 2/84 (2%)
Frame = +2
Query: 125 STQSCSPKLPSTPKPTERR*HRLCSRLFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGV 304
ST S +PKL S+ P R S +T +I + +LY+S + + + D +
Sbjct: 58 STTSDTPKLSSSSAPRSRLSFTTPSST-STNLPRTSITSHKTLYSSPAAARVSVSTNDSL 116
Query: 305 SHTVP--IYEGYALPHAILRLDLA 370
SH+ P Y G + I R +A
Sbjct: 117 SHSTPHNTYRGISKYSTIERSTVA 140
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 119 PRSTQSCSPKLPSTPKPTE 175
P STQ+ P+LP P+P E
Sbjct: 21 PMSTQTSEPQLPDVPEPNE 39
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 119 PRSTQSCSPKLPSTPKPTE 175
P STQ+ P+LP P+P E
Sbjct: 89 PMSTQTSEPQLPDVPEPNE 107
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 119 PRSTQSCSPKLPSTPKPTE 175
P STQ+ P+LP P+P E
Sbjct: 21 PMSTQTSEPQLPDVPEPNE 39
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 27.9 bits (59), Expect = 4.4
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 119 PRSTQSCSPKLPSTPKPTE 175
P STQ+ P+LP P+P E
Sbjct: 89 PMSTQTSEPQLPDVPEPNE 107
>AL110485-20|CAB60368.2| 600|Caenorhabditis elegans Hypothetical
protein Y46G5A.25 protein.
Length = 600
Score = 27.5 bits (58), Expect = 5.8
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = -1
Query: 243 TAWIATYMAGVLNSLEHNLCHLLSVGFGV 157
T W+A Y ++ LC LS+GFGV
Sbjct: 250 TDWVALYNFKTWSAALTQLCFSLSIGFGV 278
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 27.5 bits (58), Expect = 5.8
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 268 YHRYRAGFRRWCIP 309
YH+YRA FR W +P
Sbjct: 135 YHKYRAFFRGWFVP 148
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 31 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 132
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 452 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 486
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 31 YPIEHGIVTN-WDDMEKIWHHTFYNELRVAPEEHP 132
+P E+ IV++ WD + +W E +AP +HP
Sbjct: 493 HPTENEIVSSAWDGVTTVWTWDERQEGVIAPYDHP 527
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,304,167
Number of Sequences: 27780
Number of extensions: 281000
Number of successful extensions: 1041
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 972
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1037
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -