Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_N19
(293 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF471231-1|AAQ05406.1| 128|Homo sapiens Ig heavy chain variable... 32 0.29
AK124894-1|BAC85984.1| 167|Homo sapiens protein ( Homo sapiens ... 31 0.67
AY314006-1|AAP79899.1| 1817|Homo sapiens DEC-205/DCL-1 fusion pr... 30 1.2
AY184222-1|AAN85434.1| 1873|Homo sapiens DEC-205/DCL-1 fusion pr... 30 1.2
AF064827-1|AAC62622.1| 1722|Homo sapiens gp200-MR6 protein. 30 1.2
AF011333-1|AAC17636.1| 1722|Homo sapiens DEC-205 protein. 30 1.2
AC093873-1|AAY24189.1| 806|Homo sapiens unknown protein. 30 1.2
Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain pro... 29 3.6
AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein. 29 3.6
AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain pr... 29 3.6
AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein. 29 3.6
M83233-1|AAB62389.1| 682|Homo sapiens transcription factor prot... 28 6.2
M80627-1|AAA58632.1| 682|Homo sapiens helix-loop-helix protein ... 28 6.2
BC050556-1|AAH50556.1| 706|Homo sapiens transcription factor 12... 28 6.2
AL831981-1|CAD89914.1| 682|Homo sapiens hypothetical protein pr... 28 6.2
BC150182-1|AAI50183.1| 1192|Homo sapiens reticulon 4 protein. 27 8.2
BC016165-1|AAH16165.1| 392|Homo sapiens reticulon 4 protein. 27 8.2
BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein. 27 8.2
AY102285-2|AAM64242.1| 392|Homo sapiens RTN4 protein. 27 8.2
AY102285-1|AAM64243.1| 1192|Homo sapiens RTN4 protein. 27 8.2
AY102279-1|AAM64248.1| 1192|Homo sapiens RTN4 isoform A protein. 27 8.2
AY102278-1|AAM64247.1| 392|Homo sapiens RTN4 isoform B2 protein. 27 8.2
AJ251383-1|CAB99248.1| 1192|Homo sapiens Nogo-A protein protein. 27 8.2
AF148537-1|AAG12176.1| 1192|Homo sapiens reticulon 4a protein. 27 8.2
AB040462-1|BAB18927.1| 1192|Homo sapiens RTN-xL protein. 27 8.2
AB020693-1|BAA74909.2| 1233|Homo sapiens KIAA0886 protein protein. 27 8.2
>AF471231-1|AAQ05406.1| 128|Homo sapiens Ig heavy chain variable
region, VH3 family protein.
Length = 128
Score = 32.3 bits (70), Expect = 0.29
Identities = 22/65 (33%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Frame = +2
Query: 23 DDFHVYSIRWAPDRITLLVDGEEWARVDPA-ASGLRGRFAKS-CXLPHTLLNMGSSMAPF 196
DD+ ++ +R P + V G W RV A A +RGRF S ++L +S+ P
Sbjct: 30 DDYAMHWVRQVPGKGLEWVSGISWNRVKTAYADSVRGRFTISRDNAKNSLFLQMNSLRPE 89
Query: 197 DDHFY 211
D FY
Sbjct: 90 DTAFY 94
>AK124894-1|BAC85984.1| 167|Homo sapiens protein ( Homo sapiens
cDNA FLJ42904 fis, clone BRHIP3013897. ).
Length = 167
Score = 31.1 bits (67), Expect = 0.67
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -3
Query: 150 LQDLAKRPRSPLAAGSTRAHSSPSTNNVIRSGAHLIEYTWKSSPHWD 10
+ L RP P +T HS P + ++R+GA W+S+P WD
Sbjct: 74 VHSLPHRPAFPHPP-NTCTHSIPFPHVLLRTGAWASGTAWESTPWWD 119
>AY314006-1|AAP79899.1| 1817|Homo sapiens DEC-205/DCL-1 fusion
protein variant V33-2 protein.
Length = 1817
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 GSQWGDDFHVYSIRWAPDRITL-LVDGEEWARVDPAASGLRGRFAKSCXLPH 160
G +W D + + W PDR + + G AR+D A SGL F+ LP+
Sbjct: 288 GWEWSDHKPLNFLNWDPDRPSAPTIGGSSCARMD-AESGLWQSFSCEAQLPY 338
>AY184222-1|AAN85434.1| 1873|Homo sapiens DEC-205/DCL-1 fusion
protein variant V34-2 protein.
Length = 1873
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 GSQWGDDFHVYSIRWAPDRITL-LVDGEEWARVDPAASGLRGRFAKSCXLPH 160
G +W D + + W PDR + + G AR+D A SGL F+ LP+
Sbjct: 288 GWEWSDHKPLNFLNWDPDRPSAPTIGGSSCARMD-AESGLWQSFSCEAQLPY 338
>AF064827-1|AAC62622.1| 1722|Homo sapiens gp200-MR6 protein.
Length = 1722
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 GSQWGDDFHVYSIRWAPDRITL-LVDGEEWARVDPAASGLRGRFAKSCXLPH 160
G +W D + + W PDR + + G AR+D A SGL F+ LP+
Sbjct: 288 GWEWSDHKPLNFLNWDPDRPSAPTIGGSSCARMD-AESGLWQSFSCEAQLPY 338
>AF011333-1|AAC17636.1| 1722|Homo sapiens DEC-205 protein.
Length = 1722
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 GSQWGDDFHVYSIRWAPDRITL-LVDGEEWARVDPAASGLRGRFAKSCXLPH 160
G +W D + + W PDR + + G AR+D A SGL F+ LP+
Sbjct: 288 GWEWSDHKPLNFLNWDPDRPSAPTIGGSSCARMD-AESGLWQSFSCEAQLPY 338
>AC093873-1|AAY24189.1| 806|Homo sapiens unknown protein.
Length = 806
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 8 GSQWGDDFHVYSIRWAPDRITL-LVDGEEWARVDPAASGLRGRFAKSCXLPH 160
G +W D + + W PDR + + G AR+D A SGL F+ LP+
Sbjct: 288 GWEWSDHKPLNFLNWDPDRPSAPTIGGSSCARMD-AESGLWQSFSCEAQLPY 338
>Z95636-1|CAB09137.1| 953|Homo sapiens laminin alpha 5 chain
protein.
Length = 953
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 FHVYSIRWAPDRITLLVDG-EEWARVDPAASGLRGRFAKSCXLPHTLLNMGSSMAPFDDH 205
+H S+RW +RI L+ DG W++ P R PHTL G +
Sbjct: 683 WHKVSVRWEKNRILLVTDGARAWSQEGPH----RQHQGAEHPQPHTLFVGGLPASSHSSK 738
Query: 206 FYLTLGVAAGSISEFR 253
+T+G +G + R
Sbjct: 739 LPVTVGF-SGCVKRLR 753
>AL354836-5|CAC22310.1| 3690|Homo sapiens laminin, alpha 5 protein.
Length = 3690
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 FHVYSIRWAPDRITLLVDG-EEWARVDPAASGLRGRFAKSCXLPHTLLNMGSSMAPFDDH 205
+H S+RW +RI L+ DG W++ P R PHTL G +
Sbjct: 3420 WHKVSVRWEKNRILLVTDGARAWSQEGPH----RQHQGAEHPQPHTLFVGGLPASSHSSK 3475
Query: 206 FYLTLGVAAGSISEFR 253
+T+G +G + R
Sbjct: 3476 LPVTVGF-SGCVKRLR 3490
>AF443072-1|AAM12527.1| 3695|Homo sapiens laminin alpha5 chain
precursor protein.
Length = 3695
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 FHVYSIRWAPDRITLLVDG-EEWARVDPAASGLRGRFAKSCXLPHTLLNMGSSMAPFDDH 205
+H S+RW +RI L+ DG W++ P R PHTL G +
Sbjct: 3425 WHKVSVRWEKNRILLVTDGARAWSQEGPH----RQHQGAEHPQPHTLFVGGLPASSHSSK 3480
Query: 206 FYLTLGVAAGSISEFR 253
+T+G +G + R
Sbjct: 3481 LPVTVGF-SGCVKRLR 3495
>AB011105-1|BAA25459.1| 1645|Homo sapiens KIAA0533 protein protein.
Length = 1645
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 FHVYSIRWAPDRITLLVDG-EEWARVDPAASGLRGRFAKSCXLPHTLLNMGSSMAPFDDH 205
+H S+RW +RI L+ DG W++ P R PHTL G +
Sbjct: 1375 WHKVSVRWEKNRILLVTDGARAWSQEGPH----RQHQGAEHPQPHTLFVGGLPASSHSSK 1430
Query: 206 FYLTLGVAAGSISEFR 253
+T+G +G + R
Sbjct: 1431 LPVTVGF-SGCVKRLR 1445
>M83233-1|AAB62389.1| 682|Homo sapiens transcription factor
protein.
Length = 682
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 282 GLPAAVYTPSLNSDILPAATPS 217
GLP++VY PS NSD +PS
Sbjct: 189 GLPSSVYAPSPNSDDFNRESPS 210
>M80627-1|AAA58632.1| 682|Homo sapiens helix-loop-helix protein
protein.
Length = 682
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 282 GLPAAVYTPSLNSDILPAATPS 217
GLP++VY PS NSD +PS
Sbjct: 189 GLPSSVYAPSPNSDDFNRESPS 210
>BC050556-1|AAH50556.1| 706|Homo sapiens transcription factor 12
(HTF4, helix-loop-helix transcription factors 4)
protein.
Length = 706
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 282 GLPAAVYTPSLNSDILPAATPS 217
GLP++VY PS NSD +PS
Sbjct: 189 GLPSSVYAPSPNSDDFNRESPS 210
>AL831981-1|CAD89914.1| 682|Homo sapiens hypothetical protein
protein.
Length = 682
Score = 27.9 bits (59), Expect = 6.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -3
Query: 282 GLPAAVYTPSLNSDILPAATPS 217
GLP++VY PS NSD +PS
Sbjct: 189 GLPSSVYAPSPNSDDFNRESPS 210
>BC150182-1|AAI50183.1| 1192|Homo sapiens reticulon 4 protein.
Length = 1192
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 267 VYTPSLNSDILPAATPSVK*KWSSKGAIDEPMF 169
V+TP + P +TP+ + S G++DE +F
Sbjct: 158 VWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLF 190
>BC016165-1|AAH16165.1| 392|Homo sapiens reticulon 4 protein.
Length = 392
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 267 VYTPSLNSDILPAATPSVK*KWSSKGAIDEPMF 169
V+TP + P +TP+ + S G++DE +F
Sbjct: 158 VWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLF 190
>BC003355-1|AAH03355.1| 670|Homo sapiens LAMA5 protein protein.
Length = 670
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 29 FHVYSIRWAPDRITLLVDG-EEWARVDP 109
+H S+RW +RI L+ DG W++ P
Sbjct: 590 WHKVSVRWEKNRILLVTDGARAWSQEGP 617
>AY102285-2|AAM64242.1| 392|Homo sapiens RTN4 protein.
Length = 392
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 267 VYTPSLNSDILPAATPSVK*KWSSKGAIDEPMF 169
V+TP + P +TP+ + S G++DE +F
Sbjct: 158 VWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLF 190
>AY102285-1|AAM64243.1| 1192|Homo sapiens RTN4 protein.
Length = 1192
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 267 VYTPSLNSDILPAATPSVK*KWSSKGAIDEPMF 169
V+TP + P +TP+ + S G++DE +F
Sbjct: 158 VWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLF 190
>AY102279-1|AAM64248.1| 1192|Homo sapiens RTN4 isoform A protein.
Length = 1192
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 267 VYTPSLNSDILPAATPSVK*KWSSKGAIDEPMF 169
V+TP + P +TP+ + S G++DE +F
Sbjct: 158 VWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLF 190
>AY102278-1|AAM64247.1| 392|Homo sapiens RTN4 isoform B2 protein.
Length = 392
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 267 VYTPSLNSDILPAATPSVK*KWSSKGAIDEPMF 169
V+TP + P +TP+ + S G++DE +F
Sbjct: 158 VWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLF 190
>AJ251383-1|CAB99248.1| 1192|Homo sapiens Nogo-A protein protein.
Length = 1192
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 267 VYTPSLNSDILPAATPSVK*KWSSKGAIDEPMF 169
V+TP + P +TP+ + S G++DE +F
Sbjct: 158 VWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLF 190
>AF148537-1|AAG12176.1| 1192|Homo sapiens reticulon 4a protein.
Length = 1192
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 267 VYTPSLNSDILPAATPSVK*KWSSKGAIDEPMF 169
V+TP + P +TP+ + S G++DE +F
Sbjct: 158 VWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLF 190
>AB040462-1|BAB18927.1| 1192|Homo sapiens RTN-xL protein.
Length = 1192
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 267 VYTPSLNSDILPAATPSVK*KWSSKGAIDEPMF 169
V+TP + P +TP+ + S G++DE +F
Sbjct: 158 VWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLF 190
>AB020693-1|BAA74909.2| 1233|Homo sapiens KIAA0886 protein protein.
Length = 1233
Score = 27.5 bits (58), Expect = 8.2
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 267 VYTPSLNSDILPAATPSVK*KWSSKGAIDEPMF 169
V+TP + P +TP+ + S G++DE +F
Sbjct: 199 VWTPPAPAPAAPPSTPAAPKRRGSSGSVDETLF 231
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,803,945
Number of Sequences: 237096
Number of extensions: 917130
Number of successful extensions: 2499
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2499
length of database: 76,859,062
effective HSP length: 74
effective length of database: 59,313,958
effective search space used: 1364221034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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