Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_N14
         (509 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z93383-11|CAI58635.1|  279|Caenorhabditis elegans Hypothetical p...    29   2.0  
Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical pr...    28   4.5  

>Z93383-11|CAI58635.1|  279|Caenorhabditis elegans Hypothetical
           protein F54B8.16 protein.
          Length = 279

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = +3

Query: 21  IVVKALSLYRVKN--TFGLSK-TFSYLF*RENFFSIFEPI 131
           + VK LS+Y ++   T G+ K TF+++   E F S+F PI
Sbjct: 75  LAVKNLSIYMLETSVTMGIIKGTFAFMITLERFISVFFPI 114


>Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical
           protein F56D5.9 protein.
          Length = 1132

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -1

Query: 386 TI*IVSTLNWYYIVLIFFGKV 324
           TI I +++ WY+IVLI FG +
Sbjct: 720 TIWIQNSIPWYFIVLIIFGSL 740


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,965,424
Number of Sequences: 27780
Number of extensions: 179427
Number of successful extensions: 287
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 285
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 287
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 988489374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)