Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_N13
(404 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal prot... 126 1e-29
L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal prot... 126 1e-29
L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal prot... 126 1e-29
L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal prot... 126 1e-29
AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-P... 126 1e-29
AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-P... 124 3e-29
L02074-3|AAB05984.1| 200|Drosophila melanogaster protein ( Dros... 102 2e-22
L02074-2|AAB05983.1| 200|Drosophila melanogaster protein ( Dros... 102 2e-22
AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p pro... 63 1e-10
AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-P... 63 1e-10
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA... 30 1.0
AY058267-1|AAL13496.1| 873|Drosophila melanogaster GH02025p pro... 27 9.5
AE013599-1440|AAM68661.1| 873|Drosophila melanogaster CG17739-P... 27 9.5
>L07881-1|AAA28871.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 126 bits (304), Expect = 1e-29
Identities = 68/127 (53%), Positives = 81/127 (63%)
Frame = +3
Query: 21 MTLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRL*RQAG 200
M LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR + G
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 LPYETGSPD*QPSTSLDVKRALLATDHVVTVRGNASLFEVAYVDANLSVLALVIVRKGAQ 380
P + G L +K+ T VDAN+SVLALV+++KG +
Sbjct: 61 FPMKQGVLT-HGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 381 EIPGLTD 401
+IPGLTD
Sbjct: 120 DIPGLTD 126
Score = 54.0 bits (124), Expect = 7e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 175 VAGCDDKQGFPMKQGVLTNSRVRLLMSKGH 264
+AG +DKQGFPMKQGVLT+ RVRLL+ KGH
Sbjct: 52 IAGGNDKQGFPMKQGVLTHGRVRLLLKKGH 81
>L02075-1|AAB05985.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 126 bits (304), Expect = 1e-29
Identities = 68/127 (53%), Positives = 81/127 (63%)
Frame = +3
Query: 21 MTLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRL*RQAG 200
M LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR + G
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 LPYETGSPD*QPSTSLDVKRALLATDHVVTVRGNASLFEVAYVDANLSVLALVIVRKGAQ 380
P + G L +K+ T VDAN+SVLALV+++KG +
Sbjct: 61 FPMKQGVLT-HGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 381 EIPGLTD 401
+IPGLTD
Sbjct: 120 DIPGLTD 126
Score = 54.0 bits (124), Expect = 7e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 175 VAGCDDKQGFPMKQGVLTNSRVRLLMSKGH 264
+AG +DKQGFPMKQGVLT+ RVRLL+ KGH
Sbjct: 52 IAGGNDKQGFPMKQGVLTHGRVRLLLKKGH 81
>L02074-4|AAB05982.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 126 bits (304), Expect = 1e-29
Identities = 68/127 (53%), Positives = 81/127 (63%)
Frame = +3
Query: 21 MTLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRL*RQAG 200
M LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR + G
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 LPYETGSPD*QPSTSLDVKRALLATDHVVTVRGNASLFEVAYVDANLSVLALVIVRKGAQ 380
P + G L +K+ T VDAN+SVLALV+++KG +
Sbjct: 61 FPMKQGVLT-HGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 381 EIPGLTD 401
+IPGLTD
Sbjct: 120 DIPGLTD 126
Score = 54.0 bits (124), Expect = 7e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 175 VAGCDDKQGFPMKQGVLTNSRVRLLMSKGH 264
+AG +DKQGFPMKQGVLT+ RVRLL+ KGH
Sbjct: 52 IAGGNDKQGFPMKQGVLTHGRVRLLLKKGH 81
>L01658-1|AAC34306.1| 248|Drosophila melanogaster ribosomal protein
S6 protein.
Length = 248
Score = 126 bits (304), Expect = 1e-29
Identities = 68/127 (53%), Positives = 81/127 (63%)
Frame = +3
Query: 21 MTLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRL*RQAG 200
M LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR + G
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 LPYETGSPD*QPSTSLDVKRALLATDHVVTVRGNASLFEVAYVDANLSVLALVIVRKGAQ 380
P + G L +K+ T VDAN+SVLALV+++KG +
Sbjct: 61 FPMKQGVLT-HGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 381 EIPGLTD 401
+IPGLTD
Sbjct: 120 DIPGLTD 126
Score = 54.0 bits (124), Expect = 7e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 175 VAGCDDKQGFPMKQGVLTNSRVRLLMSKGH 264
+AG +DKQGFPMKQGVLT+ RVRLL+ KGH
Sbjct: 52 IAGGNDKQGFPMKQGVLTHGRVRLLLKKGH 81
>AE014298-1078|AAN09218.1| 248|Drosophila melanogaster CG10944-PB,
isoform B protein.
Length = 248
Score = 126 bits (304), Expect = 1e-29
Identities = 68/127 (53%), Positives = 81/127 (63%)
Frame = +3
Query: 21 MTLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRL*RQAG 200
M LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR + G
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 LPYETGSPD*QPSTSLDVKRALLATDHVVTVRGNASLFEVAYVDANLSVLALVIVRKGAQ 380
P + G L +K+ T VDAN+SVLALV+++KG +
Sbjct: 61 FPMKQGVLT-HGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEK 119
Query: 381 EIPGLTD 401
+IPGLTD
Sbjct: 120 DIPGLTD 126
Score = 54.0 bits (124), Expect = 7e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 175 VAGCDDKQGFPMKQGVLTNSRVRLLMSKGH 264
+AG +DKQGFPMKQGVLT+ RVRLL+ KGH
Sbjct: 52 IAGGNDKQGFPMKQGVLTHGRVRLLLKKGH 81
>AE014298-1079|AAN09219.1| 251|Drosophila melanogaster CG10944-PC,
isoform C protein.
Length = 251
Score = 124 bits (300), Expect = 3e-29
Identities = 67/125 (53%), Positives = 80/125 (64%)
Frame = +3
Query: 27 LNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRL*RQAGLP 206
LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR + G P
Sbjct: 6 LNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQGFP 65
Query: 207 YETGSPD*QPSTSLDVKRALLATDHVVTVRGNASLFEVAYVDANLSVLALVIVRKGAQEI 386
+ G L +K+ T VDAN+SVLALV+++KG ++I
Sbjct: 66 MKQGVLT-HGRVRLLLKKGHSCYRPRRTGERKRKSVRGCIVDANMSVLALVVLKKGEKDI 124
Query: 387 PGLTD 401
PGLTD
Sbjct: 125 PGLTD 129
Score = 54.0 bits (124), Expect = 7e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 175 VAGCDDKQGFPMKQGVLTNSRVRLLMSKGH 264
+AG +DKQGFPMKQGVLT+ RVRLL+ KGH
Sbjct: 55 IAGGNDKQGFPMKQGVLTHGRVRLLLKKGH 84
>L02074-3|AAB05984.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 102 bits (245), Expect = 2e-22
Identities = 47/66 (71%), Positives = 52/66 (78%)
Frame = +3
Query: 21 MTLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRL*RQAG 200
M LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR + G
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 LPYETG 218
P + G
Sbjct: 61 FPMKQG 66
Score = 44.4 bits (100), Expect = 6e-05
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +1
Query: 175 VAGCDDKQGFPMKQGVLTNSRVRLL 249
+AG +DKQGFPMKQGVLT+ R+RLL
Sbjct: 52 IAGGNDKQGFPMKQGVLTHGRLRLL 76
>L02074-2|AAB05983.1| 200|Drosophila melanogaster protein (
Drosophila melanogasterribosomal protein S6 gene and two
potential alternativelyspliced proteins, complete cds.
).
Length = 200
Score = 102 bits (245), Expect = 2e-22
Identities = 47/66 (71%), Positives = 52/66 (78%)
Frame = +3
Query: 21 MTLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRL*RQAG 200
M LNVSYPATGCQKLFEVVDEHKLR+FYEKRMG V+AD+LGDEWKGY LR + G
Sbjct: 1 MKLNVSYPATGCQKLFEVVDEHKLRVFYEKRMGQVVEADILGDEWKGYQLRIAGGNDKQG 60
Query: 201 LPYETG 218
P + G
Sbjct: 61 FPMKQG 66
Score = 44.4 bits (100), Expect = 6e-05
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +1
Query: 175 VAGCDDKQGFPMKQGVLTNSRVRLL 249
+AG +DKQGFPMKQGVLT+ R+RLL
Sbjct: 52 IAGGNDKQGFPMKQGVLTHGRLRLL 76
>AY058620-1|AAL13849.1| 217|Drosophila melanogaster LD31286p
protein.
Length = 217
Score = 63.3 bits (147), Expect = 1e-10
Identities = 39/96 (40%), Positives = 51/96 (53%)
Frame = +3
Query: 114 MGAEVDADLLGDEWKGYVLRCCRL*RQAGLPYETGSPD*QPSTSLDVKRALLATDHVVTV 293
MG V+AD+LGDEWKGY LR + G P + G L +K+ T
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLT-HGRVRLLLKKGHSCYRPRRTG 59
Query: 294 RGNASLFEVAYVDANLSVLALVIVRKGAQEIPGLTD 401
VDAN+SVLALV+++KG ++IPGLTD
Sbjct: 60 ERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTD 95
Score = 54.0 bits (124), Expect = 7e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 175 VAGCDDKQGFPMKQGVLTNSRVRLLMSKGH 264
+AG +DKQGFPMKQGVLT+ RVRLL+ KGH
Sbjct: 21 IAGGNDKQGFPMKQGVLTHGRVRLLLKKGH 50
>AE014298-1080|AAF46288.1| 217|Drosophila melanogaster CG10944-PA,
isoform A protein.
Length = 217
Score = 63.3 bits (147), Expect = 1e-10
Identities = 39/96 (40%), Positives = 51/96 (53%)
Frame = +3
Query: 114 MGAEVDADLLGDEWKGYVLRCCRL*RQAGLPYETGSPD*QPSTSLDVKRALLATDHVVTV 293
MG V+AD+LGDEWKGY LR + G P + G L +K+ T
Sbjct: 1 MGQVVEADILGDEWKGYQLRIAGGNDKQGFPMKQGVLT-HGRVRLLLKKGHSCYRPRRTG 59
Query: 294 RGNASLFEVAYVDANLSVLALVIVRKGAQEIPGLTD 401
VDAN+SVLALV+++KG ++IPGLTD
Sbjct: 60 ERKRKSVRGCIVDANMSVLALVVLKKGEKDIPGLTD 95
Score = 54.0 bits (124), Expect = 7e-08
Identities = 23/30 (76%), Positives = 27/30 (90%)
Frame = +1
Query: 175 VAGCDDKQGFPMKQGVLTNSRVRLLMSKGH 264
+AG +DKQGFPMKQGVLT+ RVRLL+ KGH
Sbjct: 21 IAGGNDKQGFPMKQGVLTHGRVRLLLKKGH 50
>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
protein.
Length = 3111
Score = 30.3 bits (65), Expect = 1.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = -2
Query: 400 SVSPGISCAPLRTMTRAKTERLASTYATSNRLAFPLTVTTWSVASSALLTS 248
S+SP SC+ LR+ T T ++ TS+ + + T + S + ++TS
Sbjct: 2999 SISPRASCSDLRSTTSGPTSTSTTSVTTSSYVPYNFTSSFTSRLNDPIITS 3049
>AY058267-1|AAL13496.1| 873|Drosophila melanogaster GH02025p
protein.
Length = 873
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 263 CPFDIKRRTRLLVRTPCFIGKPC 195
C + RTR ++RTP + GKPC
Sbjct: 747 CGDGFQLRTRRVLRTPKYGGKPC 769
>AE013599-1440|AAM68661.1| 873|Drosophila melanogaster CG17739-PA
protein.
Length = 873
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -1
Query: 263 CPFDIKRRTRLLVRTPCFIGKPC 195
C + RTR ++RTP + GKPC
Sbjct: 747 CGDGFQLRTRRVLRTPKYGGKPC 769
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,887,225
Number of Sequences: 53049
Number of extensions: 315694
Number of successful extensions: 670
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 633
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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