Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_N13
         (404 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical ...    97   4e-21
AF003740-2|AAM15562.2|  330|Caenorhabditis elegans Hypothetical ...    27   3.9  
Z77133-7|CAB00865.2|  735|Caenorhabditis elegans Hypothetical pr...    27   5.1  
AL008868-4|CAO82021.1|  735|Caenorhabditis elegans Hypothetical ...    27   5.1  
Z82077-9|CAB04941.1|  259|Caenorhabditis elegans Hypothetical pr...    27   6.8  
AL032650-2|CAA21705.1|  259|Caenorhabditis elegans Hypothetical ...    27   6.8  
Z54216-9|CAN86906.1|  155|Caenorhabditis elegans Hypothetical pr...    26   9.0  
Z54216-8|CAA90948.1|  101|Caenorhabditis elegans Hypothetical pr...    26   9.0  
Z54216-7|CAI46586.1|  299|Caenorhabditis elegans Hypothetical pr...    26   9.0  
Z54216-6|CAB76416.2|  319|Caenorhabditis elegans Hypothetical pr...    26   9.0  

>AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical
           protein Y71A12B.1 protein.
          Length = 246

 Score = 97.1 bits (231), Expect = 4e-21
 Identities = 58/127 (45%), Positives = 70/127 (55%)
 Frame = +3

Query: 21  MTLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVDADLLGDEWKGYVLRCCRL*RQAG 200
           M LN +YPATG QK FEV +E KLR+F+EKRM  EV  D LGDEWKGYV+R      + G
Sbjct: 1   MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60

Query: 201 LPYETGSPD*QPSTSLDVKRALLATDHVVTVRGNASLFEVAYVDANLSVLALVIVRKGAQ 380
            P + G         L +K+                      VDAN+S L+LVIV+KG  
Sbjct: 61  FPMKQGILT-NGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGDG 119

Query: 381 EIPGLTD 401
           EI GLTD
Sbjct: 120 EIEGLTD 126



 Score = 50.8 bits (116), Expect = 4e-07
 Identities = 21/29 (72%), Positives = 25/29 (86%)
 Frame = +1

Query: 175 VAGCDDKQGFPMKQGVLTNSRVRLLMSKG 261
           + G +DKQGFPMKQG+LTN RVRLL+ KG
Sbjct: 52  IGGGNDKQGFPMKQGILTNGRVRLLLKKG 80



 Score = 34.3 bits (75), Expect = 0.034
 Identities = 15/24 (62%), Positives = 19/24 (79%)
 Frame = +2

Query: 254 QKGTTCY*PRRDG*RKRKSVRGSI 325
           +KG +CY  R++G RKRKSVRG I
Sbjct: 78  KKGQSCYRERKNGERKRKSVRGCI 101


>AF003740-2|AAM15562.2|  330|Caenorhabditis elegans Hypothetical
           protein C41D11.4 protein.
          Length = 330

 Score = 27.5 bits (58), Expect = 3.9
 Identities = 15/34 (44%), Positives = 19/34 (55%)
 Frame = -2

Query: 355 RAKTERLASTYATSNRLAFPLTVTTWSVASSALL 254
           RA TER+A TY T +R     T +T   A  AL+
Sbjct: 275 RAVTERIAQTYGTGSRQLLKSTSSTVLPAPPALV 308


>Z77133-7|CAB00865.2|  735|Caenorhabditis elegans Hypothetical
           protein K03A11.1 protein.
          Length = 735

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 162 NLSIRRLEDLHQLQRPYAFHRRY 94
           N+ +RRLE+L  ++RP   H R+
Sbjct: 227 NMVVRRLEELGAIERPLNLHVRF 249


>AL008868-4|CAO82021.1|  735|Caenorhabditis elegans Hypothetical
           protein K03A11.1 protein.
          Length = 735

 Score = 27.1 bits (57), Expect = 5.1
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = -3

Query: 162 NLSIRRLEDLHQLQRPYAFHRRY 94
           N+ +RRLE+L  ++RP   H R+
Sbjct: 227 NMVVRRLEELGAIERPLNLHVRF 249


>Z82077-9|CAB04941.1|  259|Caenorhabditis elegans Hypothetical
           protein W09C5.1 protein.
          Length = 259

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 120 RPYAFHRRYGACAHPPLQITSDIPLPGMKRSKS 22
           RP     +     HP LQ T  +P+ G+K++ S
Sbjct: 171 RPMGLRFKKAHVTHPELQTTFHLPIVGVKKNPS 203


>AL032650-2|CAA21705.1|  259|Caenorhabditis elegans Hypothetical
           protein W09C5.1 protein.
          Length = 259

 Score = 26.6 bits (56), Expect = 6.8
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 120 RPYAFHRRYGACAHPPLQITSDIPLPGMKRSKS 22
           RP     +     HP LQ T  +P+ G+K++ S
Sbjct: 171 RPMGLRFKKAHVTHPELQTTFHLPIVGVKKNPS 203


>Z54216-9|CAN86906.1|  155|Caenorhabditis elegans Hypothetical
           protein T24H10.7d protein.
          Length = 155

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 45  ATGC-QKLFEVVDEHKLRIFYEKRMGAEVDADLL 143
           AT C QK  + + E + ++ +EK  G  +DA+LL
Sbjct: 94  ATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELL 127


>Z54216-8|CAA90948.1|  101|Caenorhabditis elegans Hypothetical
           protein T24H10.7c protein.
          Length = 101

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 45  ATGC-QKLFEVVDEHKLRIFYEKRMGAEVDADLL 143
           AT C QK  + + E + ++ +EK  G  +DA+LL
Sbjct: 40  ATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELL 73


>Z54216-7|CAI46586.1|  299|Caenorhabditis elegans Hypothetical
           protein T24H10.7b protein.
          Length = 299

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 45  ATGC-QKLFEVVDEHKLRIFYEKRMGAEVDADLL 143
           AT C QK  + + E + ++ +EK  G  +DA+LL
Sbjct: 238 ATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELL 271


>Z54216-6|CAB76416.2|  319|Caenorhabditis elegans Hypothetical
           protein T24H10.7a protein.
          Length = 319

 Score = 26.2 bits (55), Expect = 9.0
 Identities = 13/34 (38%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +3

Query: 45  ATGC-QKLFEVVDEHKLRIFYEKRMGAEVDADLL 143
           AT C QK  + + E + ++ +EK  G  +DA+LL
Sbjct: 258 ATKCRQKKMDRIKELEEQVLHEKHRGQRLDAELL 291


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,563,110
Number of Sequences: 27780
Number of extensions: 157523
Number of successful extensions: 357
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 357
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)