Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0006_N12
(453 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 26 0.22
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 22 3.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 3.6
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 3.6
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 3.6
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 3.6
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 3.6
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 3.6
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 3.6
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 21 4.7
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 4.7
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.3
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.3
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.3
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.3
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.3
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 8.3
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.3
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 8.3
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 25.8 bits (54), Expect = 0.22
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 415 YTYYYVNYNDTS*NRP-SSNCKSFYVIILN 329
Y Y NYN+ + N ++NCK Y I+N
Sbjct: 331 YNYNNNNYNNNNYNNNYNNNCKKLYYNIIN 360
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 3.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 409 YYYVNYNDTS*NRPSSNCKSFY 344
Y Y NYN+ + N +N K Y
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLY 110
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.8 bits (44), Expect = 3.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 409 YYYVNYNDTS*NRPSSNCKSFY 344
Y Y NYN+ + N +N K Y
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLY 110
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 3.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 409 YYYVNYNDTS*NRPSSNCKSFY 344
Y Y NYN+ + N +N K Y
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLY 110
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 3.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 409 YYYVNYNDTS*NRPSSNCKSFY 344
Y Y NYN+ + N +N K Y
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLY 110
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 3.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 409 YYYVNYNDTS*NRPSSNCKSFY 344
Y Y NYN+ + N +N K Y
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLY 110
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 3.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 409 YYYVNYNDTS*NRPSSNCKSFY 344
Y Y NYN+ + N +N K Y
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLY 110
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 3.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 409 YYYVNYNDTS*NRPSSNCKSFY 344
Y Y NYN+ + N +N K Y
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLY 110
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.8 bits (44), Expect = 3.6
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 409 YYYVNYNDTS*NRPSSNCKSFY 344
Y Y NYN+ + N +N K Y
Sbjct: 89 YNYSNYNNYNNNNNYNNYKKLY 110
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 4.7
Identities = 10/24 (41%), Positives = 14/24 (58%)
Frame = -3
Query: 409 YYYVNYNDTS*NRPSSNCKSFYVI 338
Y Y NYN+ + N + N K +Y I
Sbjct: 89 YNYSNYNNYNNNYNNYNKKLYYNI 112
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.4 bits (43), Expect = 4.7
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +3
Query: 36 K*NAVSKMFEHSVKVPRHYKV 98
K + + FEHS K+ RH ++
Sbjct: 149 KCDVCERAFEHSGKLHRHMRI 169
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 20.6 bits (41), Expect = 8.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 191 MAEADESPLIPIHTKRAAFALANLFLYSVAMFTL 292
M +ADES I K AA + L L +FT+
Sbjct: 412 MKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 445
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 20.6 bits (41), Expect = 8.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 191 MAEADESPLIPIHTKRAAFALANLFLYSVAMFTL 292
M +ADES I K AA + L L +FT+
Sbjct: 412 MKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 445
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 20.6 bits (41), Expect = 8.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 191 MAEADESPLIPIHTKRAAFALANLFLYSVAMFTL 292
M +ADES I K AA + L L +FT+
Sbjct: 412 MKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 445
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 20.6 bits (41), Expect = 8.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 191 MAEADESPLIPIHTKRAAFALANLFLYSVAMFTL 292
M +ADES I K AA + L L +FT+
Sbjct: 412 MKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 445
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 20.6 bits (41), Expect = 8.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 191 MAEADESPLIPIHTKRAAFALANLFLYSVAMFTL 292
M +ADES I K AA + L L +FT+
Sbjct: 412 MKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 445
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 20.6 bits (41), Expect = 8.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 191 MAEADESPLIPIHTKRAAFALANLFLYSVAMFTL 292
M +ADES I K AA + L L +FT+
Sbjct: 412 MKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 445
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 8.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 191 MAEADESPLIPIHTKRAAFALANLFLYSVAMFTL 292
M +ADES I K AA + L L +FT+
Sbjct: 480 MKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 513
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 20.6 bits (41), Expect = 8.3
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 191 MAEADESPLIPIHTKRAAFALANLFLYSVAMFTL 292
M +ADES I K AA + L L +FT+
Sbjct: 480 MKKADESDEIISDWKFAAMVVDRLCLIVFTLFTV 513
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,176
Number of Sequences: 438
Number of extensions: 1758
Number of successful extensions: 24
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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