Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_N06
         (541 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067611-3|AAC19179.1|  139|Caenorhabditis elegans Hypothetical ...    80   1e-15
U41547-6|AAA83197.1|  139|Caenorhabditis elegans Hypothetical pr...    75   2e-14
AF067611-4|AAC19181.1|  139|Caenorhabditis elegans Hypothetical ...    71   4e-13
AF067611-5|AAC19180.1|  145|Caenorhabditis elegans Hypothetical ...    50   1e-06
U58747-4|AAF99902.2|  159|Caenorhabditis elegans Hypothetical pr...    43   2e-04
Z81132-5|CAB03436.1|  345|Caenorhabditis elegans Hypothetical pr...    32   0.23 
Z81109-12|CAE17917.2|  364|Caenorhabditis elegans Hypothetical p...    29   1.6  
AC024826-17|AAF60789.1|  662|Caenorhabditis elegans Hypothetical...    29   2.8  
Z81116-13|CAB03300.1|  245|Caenorhabditis elegans Hypothetical p...    28   3.7  
Z81119-5|CAB03333.1|  386|Caenorhabditis elegans Hypothetical pr...    28   4.9  
Z81513-10|CAB04183.1|  247|Caenorhabditis elegans Hypothetical p...    27   6.5  
Z81047-13|CAB60284.1|  368|Caenorhabditis elegans Hypothetical p...    27   8.6  
U41547-7|AAP40538.1|   58|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U13071-1|AAL65794.1|  462|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>AF067611-3|AAC19179.1|  139|Caenorhabditis elegans Hypothetical
           protein C45G7.3 protein.
          Length = 139

 Score = 79.8 bits (188), Expect = 1e-15
 Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
 Frame = +3

Query: 186 CLGCICQAVSGCKQGTKCEGD----ACGLFHITWPYWADAGKPTL-NGQSPDAPDAYPNC 350
           CL CIC   SGCK    C  D    +CG + I  PY+ D G+PT  +G++ +A  A+  C
Sbjct: 20  CLHCICMRESGCKP-IGCNMDVGSLSCGYYQIKLPYYEDCGQPTKKSGETTEA--AWKRC 76

Query: 351 ANDPYCAATAVQNYMNKFGQDCNGDGVVNCYDYMAIHKLGGYGCK 485
           AND  CA T V+NY N++   C G G   C      H  G  GCK
Sbjct: 77  ANDLSCATTCVENYYNRYKSQCAGTGQGACEVMARNHNGGPQGCK 121


>U41547-6|AAA83197.1|  139|Caenorhabditis elegans Hypothetical
           protein F22A3.6a protein.
          Length = 139

 Score = 75.4 bits (177), Expect = 2e-14
 Identities = 43/110 (39%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
 Frame = +3

Query: 168 APVTEVCLGCICQAVSGCKQGTKCEGD----ACGLFHITWPYWADAGKPTLN-GQSPDAP 332
           A V+  CL CIC   SGCK    C  D    +CG + I   Y+ D G+PT   G++ +A 
Sbjct: 14  AYVSADCLHCICMRESGCKP-IGCHMDVGSLSCGYYQIKIGYYEDCGQPTKKAGETTEA- 71

Query: 333 DAYPNCANDPYCAATAVQNYMNKFGQDCNGDGVVNCYDYMAIHKLGGYGC 482
            A+  CA+D  CA T V+NY N++   CNG G+  C      H  G  GC
Sbjct: 72  -AWKRCADDLNCATTCVENYYNRYKSQCNGLGMGACQIMSRNHNGGPRGC 120


>AF067611-4|AAC19181.1|  139|Caenorhabditis elegans Hypothetical
           protein C45G7.2 protein.
          Length = 139

 Score = 71.3 bits (167), Expect = 4e-13
 Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 5/112 (4%)
 Frame = +3

Query: 186 CLGCICQAVSGCKQGTKCEGD----ACGLFHITWPYWADAGKP-TLNGQSPDAPDAYPNC 350
           CL CIC   SGCK    C  D    +CG + I  PY+ D G+P   +G+S +   A+  C
Sbjct: 20  CLHCICMRESGCKP-IGCHMDVGSLSCGYYQIKIPYYEDCGQPGKKHGESTEV--AWKRC 76

Query: 351 ANDPYCAATAVQNYMNKFGQDCNGDGVVNCYDYMAIHKLGGYGCKGDLPFNY 506
           A+D  CA   V+NY N++  +C G G   C      H  G  GC       Y
Sbjct: 77  ADDLKCATNCVENYYNRYKHECAGTGQGACEVMARNHNGGPRGCHASGTLGY 128


>AF067611-5|AAC19180.1|  145|Caenorhabditis elegans Hypothetical
           protein C45G7.1 protein.
          Length = 145

 Score = 49.6 bits (113), Expect = 1e-06
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +3

Query: 255 GLFHITWPYWADAGKP-TLNGQSPDAPDAYPNCANDPYCAATAVQNYMNKFGQDCNGDGV 431
           G F I  PY+ D G+P    G+S ++  A+  CA+D  CA T + NY +++   CNG G+
Sbjct: 28  GNFVIKLPYYIDCGEPGKQRGESTES--AWKRCADDLDCAETCMMNYYHRYKSQCNGLGM 85

Query: 432 VNC 440
             C
Sbjct: 86  SEC 88


>U58747-4|AAF99902.2|  159|Caenorhabditis elegans Hypothetical
           protein C55F2.2 protein.
          Length = 159

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 5/130 (3%)
 Frame = +3

Query: 111 ILIVGVCLADVYDVPQVNQAPVTEVCLGCICQAVSGCKQGTKCEGD-----ACGLFHITW 275
           + ++ + ++  + +   ++      CL  +C   SGC     C  D      CG F +  
Sbjct: 6   VTVISLLVSVTHQLLMFDKVEDDHPCLLAMCDQDSGCVP-LGCSVDQFDRIGCGYFRLNI 64

Query: 276 PYWADAGKPTLNGQSPDAPDAYPNCANDPYCAATAVQNYMNKFGQDCNGDGVVNCYDYMA 455
             +    +P    +  +  +A+ NCA D  C+A+ ++    KF   C G     C     
Sbjct: 65  YQFQQCYQPGKKDEDTEN-EAWMNCAQDYQCSASCIRTLATKFRVKCYGKS--ECETIAR 121

Query: 456 IHKLGGYGCK 485
           IH  G  GC+
Sbjct: 122 IHDGGANGCR 131


>Z81132-5|CAB03436.1|  345|Caenorhabditis elegans Hypothetical
           protein T26E4.7 protein.
          Length = 345

 Score = 32.3 bits (70), Expect = 0.23
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
 Frame = -1

Query: 304 VGLPAS-AQYGHVIWNKPQASPSHLVPCLQPDTAWQMQPR 188
           VG PAS  Q G   W  P A P+ L  C   ++ W   PR
Sbjct: 270 VGAPASPVQMGRSQWYNPLAGPTDLEKCGPHNSTWSYDPR 309


>Z81109-12|CAE17917.2|  364|Caenorhabditis elegans Hypothetical
           protein R10D12.17 protein.
          Length = 364

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 12/36 (33%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = +3

Query: 42  YYFILNIF*SVIMASAVIKFSAI-ILIVGVCLADVY 146
           + FI+NI   +I+    ++ ++I +L++GVC+A++Y
Sbjct: 21  FSFIINIVHLLILTRKYMRTASIYVLLIGVCIAELY 56


>AC024826-17|AAF60789.1|  662|Caenorhabditis elegans Hypothetical
           protein Y55F3AM.14 protein.
          Length = 662

 Score = 28.7 bits (61), Expect = 2.8
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -1

Query: 313 PFN-VGLPASAQYGHVIWNKPQASPSHLVPCLQPDTAWQMQPRHTSVTG 170
           PF  V LP SA +G +  +KP A P H  P     +A++  P  +S++G
Sbjct: 542 PFTPVELPNSADFGPLTASKPHAVPFH--PSEMCLSAFRKVPESSSISG 588


>Z81116-13|CAB03300.1|  245|Caenorhabditis elegans Hypothetical
           protein T06C12.14 protein.
          Length = 245

 Score = 28.3 bits (60), Expect = 3.7
 Identities = 12/27 (44%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = +3

Query: 333 DAYPNCAND-PYCAATAVQNYMNKFGQ 410
           DA P+CAND   C A  +Q ++N + Q
Sbjct: 161 DAVPDCANDRSICNAVGLQTFVNTYCQ 187


>Z81119-5|CAB03333.1|  386|Caenorhabditis elegans Hypothetical
           protein T10H4.6 protein.
          Length = 386

 Score = 27.9 bits (59), Expect = 4.9
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +3

Query: 15  TPFFISIFNYYFILNIF*SVIMASAVIKFSAI-ILIVGVCLADV 143
           T  F+  F  +  +NI   +++    ++  AI IL++G+CLAD+
Sbjct: 37  TNVFMQFFTVF--INILHLIVLFQKELRTGAIYILMIGICLADI 78


>Z81513-10|CAB04183.1|  247|Caenorhabditis elegans Hypothetical
           protein F26D2.13 protein.
          Length = 247

 Score = 27.5 bits (58), Expect = 6.5
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +3

Query: 333 DAYPNCANDP-YCAATAVQNYMNK 401
           DA  +CANDP  C    +QN++N+
Sbjct: 157 DAVTDCANDPSICNMVGMQNFVNQ 180


>Z81047-13|CAB60284.1|  368|Caenorhabditis elegans Hypothetical
           protein C41G6.15 protein.
          Length = 368

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 9/32 (28%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
 Frame = +3

Query: 51  ILNIF*SVIMASAVIKFSAI-ILIVGVCLADV 143
           I+N+F  +++    ++ S++ IL++G+C++D+
Sbjct: 46  IVNLFHLIVLFQKELRSSSVYILMIGICISDI 77


>U41547-7|AAP40538.1|   58|Caenorhabditis elegans Hypothetical
           protein F22A3.6b protein.
          Length = 58

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
 Frame = +3

Query: 168 APVTEVCLGCICQAVSGCKQGTKCEGD----ACGLFHI 269
           A V+  CL CIC   SGCK    C  D    +CG + +
Sbjct: 14  AYVSADCLHCICMRESGCKP-IGCHMDVGSLSCGYYQV 50


>U13071-1|AAL65794.1|  462|Caenorhabditis elegans Hypothetical
           protein T22F7.5 protein.
          Length = 462

 Score = 27.1 bits (57), Expect = 8.6
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +3

Query: 162 NQAPVTEVCLGCICQAVSGCKQGTKCEGDACGLFHITWPY 281
           N A + +  +G  C A   C  GT C    C   H + PY
Sbjct: 248 NSACLDKSAIGAACTADEQCPNGTVCTLMMCKCAHGSSPY 287


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,648,490
Number of Sequences: 27780
Number of extensions: 271136
Number of successful extensions: 783
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 710
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 773
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1081316076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)