Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_N03
         (610 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z29117-6|CAA82378.1|  176|Caenorhabditis elegans Hypothetical pr...    29   2.6  
U00033-3|AAC48304.2|  351|Caenorhabditis elegans Serpentine rece...    29   3.4  
U00033-2|AAP68944.1|  351|Caenorhabditis elegans Serpentine rece...    29   3.4  
Z82263-6|CAJ76936.1|  383|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z82263-3|CAB62793.2|  451|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z82263-2|CAE46670.1|  445|Caenorhabditis elegans Hypothetical pr...    28   4.5  

>Z67990-6|CAA91937.1|  199|Caenorhabditis elegans Hypothetical
           protein F02D10.6 protein.
          Length = 199

 Score = 29.9 bits (64), Expect = 1.5
 Identities = 15/52 (28%), Positives = 22/52 (42%)
 Frame = +1

Query: 178 CLNVQFINHKFVTTFLFIIYYVKYIYNLGYFIQVLEAS*YFIISFLQLKLGV 333
           C  + F  ++     L + Y V  +Y LGY I     S YF+  F     G+
Sbjct: 64  CKTLNFAIYRAGFRLLHMCYNVYILYTLGYMIVPFHISLYFLFEFTYTVYGI 115


>Z29117-6|CAA82378.1|  176|Caenorhabditis elegans Hypothetical
           protein C48B4.6 protein.
          Length = 176

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +1

Query: 202 HKFVTTFLFIIYYVKYIYNLGYFIQVLE 285
           HKF  + +F +YY+ YI     FI+ LE
Sbjct: 118 HKFGCSIMFSLYYIGYIVVCFLFIEALE 145


>U00033-3|AAC48304.2|  351|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 9 protein.
          Length = 351

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 427 ILVVFYHIVFIGSYIIIHFYFV 362
           I VVFYH+ F  SYII+   F+
Sbjct: 249 ITVVFYHVAFFCSYIILVLTFL 270


>U00033-2|AAP68944.1|  351|Caenorhabditis elegans Serpentine
           receptor, class b (beta)protein 8 protein.
          Length = 351

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = -1

Query: 427 ILVVFYHIVFIGSYIIIHFYFV 362
           I VVFYH+ F  SYII+   F+
Sbjct: 249 ITVVFYHVAFFCSYIILVLTFL 270


>Z82263-6|CAJ76936.1|  383|Caenorhabditis elegans Hypothetical
           protein C47A4.2c protein.
          Length = 383

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = -1

Query: 574 CNFFTYIIFLVLKLIDTNQASNFNIESSEYTIILILITFWVCKISVWCCILVVFY 410
           C  FT ++ +V  L  + QA    +    Y  I +LI F VC +S W C  + FY
Sbjct: 135 CGTFTSVLAIVATLAFSTQAETVALI---YFGISLLILF-VCLVSWWFCKKMDFY 185


>Z82263-3|CAB62793.2|  451|Caenorhabditis elegans Hypothetical
           protein C47A4.2b protein.
          Length = 451

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = -1

Query: 574 CNFFTYIIFLVLKLIDTNQASNFNIESSEYTIILILITFWVCKISVWCCILVVFY 410
           C  FT ++ +V  L  + QA    +    Y  I +LI F VC +S W C  + FY
Sbjct: 203 CGTFTSVLAIVATLAFSTQAETVALI---YFGISLLILF-VCLVSWWFCKKMDFY 253


>Z82263-2|CAE46670.1|  445|Caenorhabditis elegans Hypothetical
           protein C47A4.2a protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 19/55 (34%), Positives = 27/55 (49%)
 Frame = -1

Query: 574 CNFFTYIIFLVLKLIDTNQASNFNIESSEYTIILILITFWVCKISVWCCILVVFY 410
           C  FT ++ +V  L  + QA    +    Y  I +LI F VC +S W C  + FY
Sbjct: 197 CGTFTSVLAIVATLAFSTQAETVALI---YFGISLLILF-VCLVSWWFCKKMDFY 247


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,165,327
Number of Sequences: 27780
Number of extensions: 247272
Number of successful extensions: 766
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 739
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)