Samia BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_N01
         (557 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces po...    27   1.9  
SPBC15D4.14 |taf73||TATA-binding protein associated factor |Schi...    26   3.3  
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy...    25   7.5  
SPCC1672.09 |||triglyceride lipase-cholesterol esterase |Schizos...    25   7.5  

>SPAC24C9.08 |||vacuolar carboxypeptidase |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 596

 Score = 27.1 bits (57), Expect = 1.9
 Identities = 14/32 (43%), Positives = 17/32 (53%)
 Frame = -2

Query: 124 YSKSALASRVRPLCDETVTPESLPMNTDIKHY 29
           Y K A A R       +VTP  +P NTD +HY
Sbjct: 508 YKKLAGAIRYTFGDGTSVTPALMPANTDTRHY 539


>SPBC15D4.14 |taf73||TATA-binding protein associated factor
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 642

 Score = 26.2 bits (55), Expect = 3.3
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
 Frame = -2

Query: 184 NFQGFVTQRAGGSGRDRDLF-YSKSALASRVRPLCDETVT 68
           N Q  ++++ G  G    L  Y+K ++   +RPL +E VT
Sbjct: 214 NEQTIISEQEGIPGHSEQLLDYNKQSIQLGLRPLSEEVVT 253


>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 613

 Score = 25.0 bits (52), Expect = 7.5
 Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
 Frame = -1

Query: 521 IPKNLTYNINSNNSCLSSHL-QST*HKSFIFNLIENESYFNSMKRCALPKK 372
           +P N   NI+++ +  +  + Q       I + ++N++YF     CA+ K+
Sbjct: 516 VPYNYFTNISTDRTYYTEDMIQQLLTNGLISSTVDNDTYFGQCFACAVVKR 566


>SPCC1672.09 |||triglyceride lipase-cholesterol esterase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 467

 Score = 25.0 bits (52), Expect = 7.5
 Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = -1

Query: 218 HLIKIENTYSLKLSRFRHAASGRVGT-RPRSL 126
           HL++ E+ Y L + R    + GR+G+  P+ L
Sbjct: 95  HLVRTEDDYILCIHRISKDSPGRIGSPHPKKL 126


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,930,604
Number of Sequences: 5004
Number of extensions: 33296
Number of successful extensions: 69
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 69
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 233995432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)