Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0006_M24
         (382 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical pr...    30   0.64 
Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical pr...    30   0.64 
Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical pr...    30   0.64 
U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical pr...    30   0.64 
U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical pr...    30   0.64 
Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical pr...    29   0.85 
Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical pr...    29   0.85 
U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical pr...    29   0.85 
Z82082-5|CAE53733.1|   72|Caenorhabditis elegans Hypothetical pr...    27   6.0  

>Z66499-4|CAA91301.1|  164|Caenorhabditis elegans Hypothetical
           protein T01B7.8 protein.
          Length = 164

 Score = 29.9 bits (64), Expect = 0.64
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +1

Query: 22  CVRTCVRALVYACVRACVLGCVLGCVLSG 108
           C RTC       C R C  GC  GC   G
Sbjct: 101 CCRTCCCTRCCTCCRPCCCGCGCGCGCCG 129


>Z49886-6|CAI79131.1|  149|Caenorhabditis elegans Hypothetical
           protein C06A1.7 protein.
          Length = 149

 Score = 29.9 bits (64), Expect = 0.64
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +1

Query: 22  CVRTCVRALVYACVRACVLGCVLGCVLSG 108
           C RTC       C R C  GC  GC   G
Sbjct: 87  CCRTCCCTRCCTCCRPCCCGCGCGCGCCG 115


>Z49886-5|CAA90055.1|  152|Caenorhabditis elegans Hypothetical
           protein C06A1.6 protein.
          Length = 152

 Score = 29.9 bits (64), Expect = 0.64
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +1

Query: 22  CVRTCVRALVYACVRACVLGCVLGCVLSG 108
           C RTC       C R C  GC  GC   G
Sbjct: 90  CCRTCCCTRCCTCCRPCCCGCGCGCGCCG 118


>U58760-7|AAK31463.1|  188|Caenorhabditis elegans Hypothetical
           protein C27A2.5 protein.
          Length = 188

 Score = 29.9 bits (64), Expect = 0.64
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +1

Query: 22  CVRTCVRALVYACVRACVLGCVLGCVLSG 108
           C RTC       C R C  GC  GC   G
Sbjct: 102 CCRTCCCTRCCTCCRPCCCGCGCGCGCCG 130


>U55854-7|AAK68158.1|  166|Caenorhabditis elegans Hypothetical
           protein C04G6.10 protein.
          Length = 166

 Score = 29.9 bits (64), Expect = 0.64
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +1

Query: 22  CVRTCVRALVYACVRACVLGCVLGCVLSG 108
           C RTC       C R C  GC  GC   G
Sbjct: 102 CCRTCCCTRCCTCCRPCCCGCGCGCGCCG 130


>Z81579-4|CAE17915.1|  212|Caenorhabditis elegans Hypothetical
           protein R13H4.8 protein.
          Length = 212

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +1

Query: 22  CVRTCVRALVYACVRACVLGCVLGC 96
           C RTC       C R C  GC  GC
Sbjct: 103 CCRTCCCTRCCTCCRPCCCGCGCGC 127


>Z75952-5|CAB00093.2|  149|Caenorhabditis elegans Hypothetical
           protein F29D10.2 protein.
          Length = 149

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +1

Query: 22  CVRTCVRALVYACVRACVLGCVLGC 96
           C RTC       C R C  GC  GC
Sbjct: 85  CCRTCCCTRCCTCCRPCCCGCGCGC 109


>U55854-6|AAK68161.1|  197|Caenorhabditis elegans Hypothetical
           protein C04G6.7 protein.
          Length = 197

 Score = 29.5 bits (63), Expect = 0.85
 Identities = 11/25 (44%), Positives = 11/25 (44%)
 Frame = +1

Query: 22  CVRTCVRALVYACVRACVLGCVLGC 96
           C RTC       C R C  GC  GC
Sbjct: 103 CCRTCCCTRCCTCCRPCCCGCGCGC 127


>Z82082-5|CAE53733.1|   72|Caenorhabditis elegans Hypothetical
           protein ZC334.8 protein.
          Length = 72

 Score = 26.6 bits (56), Expect = 6.0
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
 Frame = +1

Query: 262 CSGTRSCEVTTIGVRWLVPMYD----CCDNL 342
           CSG  S ++ TI     VP+ D    CC NL
Sbjct: 42  CSGVSSVDIATIACATAVPIEDLKNMCCPNL 72


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,845,071
Number of Sequences: 27780
Number of extensions: 90449
Number of successful extensions: 317
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 317
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 567749674
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)